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Trim34a Gene Detail
Summary
  • Symbol
    Trim34a
  • Name
    tripartite motif-containing 34A
  • Synonyms
    Trim34, Trim34-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2137359
    NCBI Gene: 94094
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:103893664-103911441 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 55.69 cM, cytoband F1
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    530 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2137359
 protein coding gene Chr7:103893657-103911446 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032710
 protein coding gene Chr7:107470637-107489835 (+)
A/J MGP_AJ_G0032685
 protein coding gene Chr7:104660699-104675754 (+)
AKR/J MGP_AKRJ_G0032618
 protein coding gene Chr7:107184879-107300848 (+)
BALB/cJ MGP_BALBcJ_G0032695
 protein coding gene Chr7:104393326-104407770 (+)
C3H/HeJ MGP_C3HHeJ_G0032406
 protein coding gene Chr7:107542104-107555232 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033190
 protein coding gene Chr7:111515323-111655176 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030185
 protein coding gene Chr7:106747458-106767775 (+)
CAST/EiJ MGP_CASTEiJ_G0031735
 protein coding gene Chr7:99199715-99275214 (+)
CBA/J MGP_CBAJ_G0032374
 protein coding gene Chr7:115449277-115467480 (+)
DBA/2J MGP_DBA2J_G0032528
 protein coding gene Chr7:102995923-103011409 (+)
FVB/NJ MGP_FVBNJ_G0032481
 protein coding gene Chr7:102703372-102720220 (+)
LP/J MGP_LPJ_G0032621
 protein coding gene Chr7:108804180-108818226 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0033218
 protein coding gene Chr7:106388771-106486033 (+)
PWK/PhJ MGP_PWKPhJ_G0031449
 protein coding gene Chr7:95985209-96008128 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031294
 protein coding gene Chr7:93612530-93628317 (+)
WSB/EiJ MGP_WSBEiJ_G0031850
 protein coding gene Chr7:107130740-107146763 (+)



Homology
more
  • Human Ortholog
    TRIM34, tripartite motif containing 34
  • Vertebrate Orthologs
    9
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRIM34, tripartite motif containing 34
  • Synonyms
    IFP1, RNF21
  • Links
    NCBI Gene ID: 53840
    neXtProt AC: NX_Q9BYJ4
    UniProt: Q9BYJ4

  • Chr Location
    11p15.4; chr11:5619764-5644398 (+)  GRCh38
  • Human Ortholog
    TRIM6-TRIM34, TRIM6-TRIM34 readthrough
  • Synonyms
    IFP1, RNF21, RNF89, TRIM34, TRIM6
  • Links
    NCBI Gene ID: 445372

  • Chr Location
    11p15.4; chr11:5596637-5644398 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    750
  • Tissues
    44
  • cDNA Data
    9
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000056144 Ensembl Gene Model | MGI Sequence Detail 17778 C57BL/6J ±  kb
transcript ENSMUST00000106849 Ensembl | MGI Sequence Detail 2578 Not Applicable  
polypeptide ENSMUSP00000102462 Ensembl | MGI Sequence Detail 485 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 13
    Other 1

    Microarray probesets 5
References
more
  • Summaries
    All 45
    Developmental Gene Expression 3
    Gene Ontology 6
    Phenotypes 14
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:349812 Schafer A, et al., Mapping of susceptibility loci for Ebola virus pathogenesis in mice. Cell Rep. 2024 May 28;43(5):114127
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory