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1700019D03Rik Gene Detail
Summary
  • Symbol
    1700019D03Rik
  • Name
    RIKEN cDNA 1700019D03 gene
  • Synonyms
    2410136C24Rik, MGC:58779
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914330
    NCBI Gene: 67080
  • Alliance
    gene page
  • Transcription Start Sites
    15 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:52961483-53031816 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 26.99 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1458 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914330
 protein coding gene Chr1:52961483-53059338 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016013
 protein coding gene Chr1:52450669-52543900 (-)
A/J MGP_AJ_G0015995
 protein coding gene Chr1:50692446-50773342 (-)
AKR/J MGP_AKRJ_G0015951
 protein coding gene Chr1:51777208-51872116 (-)
BALB/cJ MGP_BALBcJ_G0015952
 protein coding gene Chr1:50517414-50600814 (-)
C3H/HeJ MGP_C3HHeJ_G0015784
 protein coding gene Chr1:52157696-52251381 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016403
 protein coding gene Chr1:54654881-54741012 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014121
 protein coding gene Chr1:41115418-41193841 (+)
CAST/EiJ MGP_CASTEiJ_G0015365
 protein coding gene Chr1:51661322-51747646 (-)
CBA/J MGP_CBAJ_G0015755
 protein coding gene Chr1:56111178-56205314 (-)
DBA/2J MGP_DBA2J_G0015856
 protein coding gene Chr1:49963131-50050847 (-)
FVB/NJ MGP_FVBNJ_G0015858
 protein coding gene Chr1:49412780-49513383 (-)
LP/J MGP_LPJ_G0015927
 protein coding gene Chr1:52907712-52979356 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015878
 protein coding gene Chr1:59153405-59266980 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016451
 protein coding gene Chr1:51898511-51980260 (-)
PWK/PhJ MGP_PWKPhJ_G0015151
 protein coding gene Chr1:49801338-49886366 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014931
 protein coding gene Chr1:51554427-51638688 (-)
WSB/EiJ MGP_WSBEiJ_G0015428
 protein coding gene Chr1:51714326-51804136 (-)



Homology
more
  • Human Ortholog
    C2orf88, chromosome 2 open reading frame 88
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C2orf88, chromosome 2 open reading frame 88
  • Synonyms
    smAKAP
  • Links
    NCBI Gene ID: 84281
    neXtProt AC: NX_Q9BSF0
    UniProt: Q9BSF0

  • Chr Location
    2q32.2; chr2:189879562-190203484 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    17 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    731
  • Tissues
    25
  • cDNA Data
    33
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 67080 NCBI Gene Model | MGI Sequence Detail 70334 C57BL/6J ±  kb
    transcript NM_144953 RefSeq | MGI Sequence Detail 3637 C57BL/6  
    polypeptide Q9CPS8 UniProt | EBI | MGI Sequence Detail 106 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 34
      cDNA 34

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:1915212, MGI:2138094
    References
    more
    • Summaries
      All 42
      Developmental Gene Expression 3
      Gene Ontology 2
      Phenotypes 17
    • Earliest
      J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory