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Chmp1b2 Gene Detail
Summary
  • Symbol
    Chmp1b2
  • Name
    charged multivesicular body protein 1B2
  • Synonyms
    2610002M06Rik, 8430408J07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914278
    NCBI Gene: 67028
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:106826357-106859940 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 47.62 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    803 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914278
 protein coding gene ChrX:106826357-106859940 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036016
 protein coding gene ChrX:104625628-104661674 (-)
A/J MGP_AJ_G0035995
 protein coding gene ChrX:104437517-104472163 (-)
AKR/J MGP_AKRJ_G0035914
 protein coding gene ChrX:107739533-107773266 (-)
BALB/cJ MGP_BALBcJ_G0035986
 protein coding gene ChrX:103209171-103242273 (-)
C3H/HeJ MGP_C3HHeJ_G0035692
 protein coding gene ChrX:105091825-105127108 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036512
 protein coding gene ChrX:107653807-107692826 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033340
 protein coding gene ChrX:101678502-101713191 (-)
CAST/EiJ MGP_CASTEiJ_G0034979
 protein coding gene ChrX:89170158-89203469 (-)
CBA/J MGP_CBAJ_G0035668
 protein coding gene ChrX:111045255-111081366 (-)
DBA/2J MGP_DBA2J_G0035822
 protein coding gene ChrX:103668781-103707698 (-)
FVB/NJ MGP_FVBNJ_G0035762
 protein coding gene ChrX:103040963-103073842 (-)
LP/J MGP_LPJ_G0035914
 protein coding gene ChrX:105590965-105624662 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035793
 protein coding gene ChrX:115888359-115917535 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036539
 protein coding gene ChrX:104171776-104210690 (-)
PWK/PhJ MGP_PWKPhJ_G0034675
 protein coding gene ChrX:86695806-86730645 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034504
 protein coding gene ChrX:89985606-90026797 (-)
WSB/EiJ MGP_WSBEiJ_G0035117
 protein coding gene ChrX:102948639-102982778 (-)



Homology
more
  • Human Ortholog
    CHMP1B2P, charged multivesicular body protein 1B2, pseudogene
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CHMP1B2P, charged multivesicular body protein 1B2, pseudogene
  • Links
    NCBI Gene ID: 101060146

  • Chr Location
    chrX:80228489-80335364 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    33
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    35
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67028 NCBI Gene Model | MGI Sequence Detail 33584 C57BL/6J ±  kb
transcript NM_025921 RefSeq | MGI Sequence Detail 5842 C57BL/6  
polypeptide Q9CQD4 UniProt | EBI | MGI Sequence Detail 199 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 35
    cDNA 35

    Microarray probesets 7
Other
Accession IDs
less
MGI:1921770, MGI:2147936, MGI:7280918
References
more
  • Summaries
    All 28
    Gene Ontology 6
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory