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Atp5pb Gene Detail
Summary
  • Symbol
    Atp5pb
  • Name
    ATP synthase peripheral stalk-membrane subunit b
  • Synonyms
    Atp5f1, C76477
  • Feature Type
    protein coding gene
  • IDs
    MGI:1100495
    NCBI Gene: 11950
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:105850014-105866579 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 46.46 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    492 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1100495
 protein coding gene Chr3:105850014-105867415 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027724
 protein coding gene Chr3:107331701-107349102 (-)
A/J MGP_AJ_G0027684
 protein coding gene Chr3:103898116-103915516 (-)
AKR/J MGP_AKRJ_G0027649
 protein coding gene Chr3:106475710-106493108 (-)
BALB/cJ MGP_BALBcJ_G0027696
 protein coding gene Chr3:103679456-103696858 (-)
C3H/HeJ MGP_C3HHeJ_G0027426
 protein coding gene Chr3:106815184-106837214 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028140
 protein coding gene Chr3:111336480-111353903 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025480
 protein coding gene Chr3:99971012-99989111 (-)
CAST/EiJ MGP_CASTEiJ_G0026882
 protein coding gene Chr3:105975147-105994453 (-)
CBA/J MGP_CBAJ_G0027401
 protein coding gene Chr3:115084198-115101598 (-)
DBA/2J MGP_DBA2J_G0027543
 protein coding gene Chr3:103142424-103159825 (-)
FVB/NJ MGP_FVBNJ_G0027511
 protein coding gene Chr3:101065162-101083083 (-)
LP/J MGP_LPJ_G0027650
 protein coding gene Chr3:108733974-108751375 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027541
 protein coding gene Chr3:121210742-121228175 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028195
 protein coding gene Chr3:106047522-106067497 (-)
PWK/PhJ MGP_PWKPhJ_G0026608
 protein coding gene Chr3:102923189-102941319 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026429
 protein coding gene Chr3:104052075-104070500 (-)
WSB/EiJ MGP_WSBEiJ_G0026962
 protein coding gene Chr3:106585038-106602576 (-)



Homology
more
  • Human Ortholog
    ATP5PB, ATP synthase peripheral stalk-membrane subunit b
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ATP5PB, ATP synthase peripheral stalk-membrane subunit b
  • Synonyms
    ATP5F1, PIG47
  • Links
    NCBI Gene ID: 515
    neXtProt AC: NX_P24539
    UniProt: P24539

  • Chr Location
    1p13.2; chr1:111448864-111462773 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    16 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    18
  • GO References
    10
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    807
  • Tissues
    98
  • cDNA Data
    30
  • Literature Summary
    3
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 11950 NCBI Gene Model | MGI Sequence Detail 16566 C57BL/6J ±  kb
transcript NM_001304719 RefSeq | MGI Sequence Detail 1302 ZRU/MplStud  
polypeptide Q9CQQ7 UniProt | EBI | MGI Sequence Detail 256 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    8 Sequences
  • Protein Ontology
    PR:000004458 ATP synthase F(0) complex subunit B1, mitochondrial
    (term hierarchy)
  • InterPro Domains
    IPR013837 ATP synthase, F0 complex, subunit B
    IPR008688 ATP synthase, F0 complex, subunit B/MI25
  • GlyGen
    Q9CQQ7 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 31
    cDNA 31

    Microarray probesets 3
Other
Accession IDs
less
MGI:2140039, MGI:6324349
References
more
  • Summaries
    All 51
    Developmental Gene Expression 3
    Diseases 1
    Gene Ontology 10
    Phenotypes 16
  • Earliest
    J:26127 Babalola GO, et al., Modulation of gene expression in the preimplantation mouse embryo by TGF-alpha and TGF-beta. Mol Reprod Dev. 1995 Jun;41(2):133-9
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory