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Txndc12 Gene Detail
Summary
  • Symbol
    Txndc12
  • Name
    thioredoxin domain containing 12 (endoplasmic reticulum)
  • Synonyms
    0610040B21Rik, ERp16
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913323
    NCBI Gene: 66073
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:108691875-108719317 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 50.64 cM, cytoband C7
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    849 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913323
 protein coding gene Chr4:108691798-108719324 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028562
 protein coding gene Chr4:109590906-109617713 (+)
A/J MGP_AJ_G0028525
 protein coding gene Chr4:105640219-105667234 (+)
AKR/J MGP_AKRJ_G0028472
 protein coding gene Chr4:108274636-108301547 (+)
BALB/cJ MGP_BALBcJ_G0028544
 protein coding gene Chr4:105851192-105878081 (+)
C3H/HeJ MGP_C3HHeJ_G0028258
 protein coding gene Chr4:109010567-109039011 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028984
 protein coding gene Chr4:113516493-113548301 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026275
 protein coding gene Chr4:100932580-100960938 (+)
CAST/EiJ MGP_CASTEiJ_G0027694
 protein coding gene Chr4:106867419-106894907 (+)
CBA/J MGP_CBAJ_G0028227
 protein coding gene Chr4:117251205-117277895 (+)
DBA/2J MGP_DBA2J_G0028375
 protein coding gene Chr4:105271763-105299532 (+)
FVB/NJ MGP_FVBNJ_G0028343
 protein coding gene Chr4:104138637-104165914 (+)
LP/J MGP_LPJ_G0028476
 protein coding gene Chr4:109829601-109857472 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028369
 protein coding gene Chr4:122450821-122478764 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029020
 protein coding gene Chr4:108515678-108548298 (+)
PWK/PhJ MGP_PWKPhJ_G0027420
 protein coding gene Chr4:103554586-103582581 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027244
 protein coding gene Chr4:105878154-105906614 (+)
WSB/EiJ MGP_WSBEiJ_G0027775
 protein coding gene Chr4:108691097-108720665 (+)



Homology
more
  • Human Ortholog
    TXNDC12, thioredoxin domain containing 12
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TXNDC12, thioredoxin domain containing 12
  • Synonyms
    AG1, AGR1, ERP16, ERP18, ERP19, hAG-1, hTLP19, PDIA16, TLP19
  • Links
    NCBI Gene ID: 51060
    neXtProt AC: NX_O95881
    UniProt: O95881

  • Chr Location
    1p32.3; chr1:52020131-52056171 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    15 phenotype references
  • All Mutations and Alleles
    67
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    4
  • Gene trapped
    59
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Txndc12
  • Find Mice (IMSR)
    19 strains or lines available
Phenotypic analysis of mice homozygous for a gene trap allele indicates this mutation has no notable phenotype in any parameter tested.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    800
  • Tissues
    94
  • cDNA Data
    7
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66073 NCBI Gene Model | MGI Sequence Detail 27443 C57BL/6J ±  kb
transcript NM_025334 RefSeq | MGI Sequence Detail 1275 C57BL/6  
polypeptide Q9CQU0 UniProt | EBI | MGI Sequence Detail 170 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
References
more
  • Summaries
    All 41
    Developmental Gene Expression 1
    Gene Ontology 6
    Phenotypes 15
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory