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Gtsf1l Gene Detail
Summary
  • Symbol
    Gtsf1l
  • Name
    gametocyte specific factor 1-like
  • Synonyms
    2410116G06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915486
    NCBI Gene: 68236
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:162928954-162929775 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 84.04 cM, cytoband H3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    162 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915486
 protein coding gene Chr2:162928954-162931529 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026818
 protein coding gene Chr2:168393616-168394437 (-)
A/J MGP_AJ_G0026784
 protein coding gene Chr2:161626135-161626956 (-)
AKR/J MGP_AKRJ_G0026755
 protein coding gene Chr2:166400639-166401460 (-)
BALB/cJ MGP_BALBcJ_G0026793
 protein coding gene Chr2:161951716-161952537 (-)
C3H/HeJ MGP_C3HHeJ_G0026535
 protein coding gene Chr2:166743517-166744338 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027241
 protein coding gene Chr2:173327730-173328551 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024611
 protein coding gene Chr2:154916145-154916966 (-)
CAST/EiJ MGP_CASTEiJ_G0025996
 protein coding gene Chr2:167117769-167118590 (-)
CBA/J MGP_CBAJ_G0026512
 protein coding gene Chr2:179609287-179610108 (-)
DBA/2J MGP_DBA2J_G0026650
 protein coding gene Chr2:160795206-160796027 (-)
FVB/NJ MGP_FVBNJ_G0026616
 protein coding gene Chr2:159166256-159167077 (-)
LP/J MGP_LPJ_G0026753
 protein coding gene Chr2:168535121-168535942 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026638
 protein coding gene Chr2:183279094-183279915 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027297
 protein coding gene Chr2:166283475-166284296 (-)
PWK/PhJ MGP_PWKPhJ_G0025730
 protein coding gene Chr2:160347376-160348197 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025533
 protein coding gene Chr2:165144693-165145514 (-)
WSB/EiJ MGP_WSBEiJ_G0026066
 protein coding gene Chr2:167142896-167143717 (-)



Homology
more
  • Human Ortholog
    GTSF1L, gametocyte specific factor 1 like
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GTSF1L, gametocyte specific factor 1 like
  • Synonyms
    C20orf65, dJ1028D15.4, FAM112A
  • Links
    NCBI Gene ID: 149699
    neXtProt AC: NX_Q9H1H1
    UniProt: Q9H1H1

  • Chr Location
    20q13.12; chr20:43726164-43727002 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 2 alleles in 2 genetic backgrounds
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a null mutation are viable and fertile with normal testes morphology and spermatogenesis.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    754
  • Tissues
    26
  • cDNA Data
    17
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000070708 Ensembl Gene Model | MGI Sequence Detail 822 C57BL/6J ±  kb
    transcript ENSMUST00000094653 Ensembl | MGI Sequence Detail 822 Not Applicable  
    polypeptide ENSMUSP00000092237 Ensembl | MGI Sequence Detail 151 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 19
      cDNA 17
      Primer pair 2

      Microarray probesets 3
    References
    more
    • Summaries
      All 26
      Developmental Gene Expression 2
      Gene Ontology 1
      Phenotypes 6
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory