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Zdhhc13 Gene Detail
Summary
  • Symbol
    Zdhhc13
  • Name
    zinc finger, DHHC domain containing 13
  • Synonyms
    2410004E01Rik, Hip14l, kojak, skc4
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919227
    NCBI Gene: 243983
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:48438751-48477188 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 31.11 cM, cytoband B3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1096 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919227
 protein coding gene Chr7:48438751-48477188 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032294
 protein coding gene Chr7:49392154-49432451 (+)
A/J MGP_AJ_G0032273
 protein coding gene Chr7:48700283-48738719 (+)
AKR/J MGP_AKRJ_G0032209
 protein coding gene Chr7:49842802-49882585 (+)
BALB/cJ MGP_BALBcJ_G0032285
 protein coding gene Chr7:48347831-48386521 (+)
C3H/HeJ MGP_C3HHeJ_G0031998
 protein coding gene Chr7:50216708-50256581 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032778
 protein coding gene Chr7:51699171-51738132 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029784
 protein coding gene Chr7:51875868-51914148 (+)
CAST/EiJ MGP_CASTEiJ_G0031326
 protein coding gene Chr7:41599522-41637925 (+)
CBA/J MGP_CBAJ_G0031963
 protein coding gene Chr7:53432203-53475327 (+)
DBA/2J MGP_DBA2J_G0032120
 protein coding gene Chr7:47910689-47948915 (+)
FVB/NJ MGP_FVBNJ_G0032074
 protein coding gene Chr7:47837467-47875624 (+)
LP/J MGP_LPJ_G0032201
 protein coding gene Chr7:50354237-50393687 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032111
 protein coding gene Chr7:52555560-52594708 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032795
 protein coding gene Chr7:48821908-48861136 (+)
PWK/PhJ MGP_PWKPhJ_G0031046
 protein coding gene Chr7:41242598-41283810 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030887
 protein coding gene Chr7:36992327-37031918 (+)
WSB/EiJ MGP_WSBEiJ_G0031444
 protein coding gene Chr7:49479899-49518242 (+)



Homology
more
  • Human Ortholog
    ZDHHC13, zinc finger DHHC-type palmitoyltransferase 13
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZDHHC13, zinc finger DHHC-type palmitoyltransferase 13
  • Synonyms
    HIP14L, HIP3RP
  • Links
    NCBI Gene ID: 54503
    neXtProt AC: NX_Q8IUH4
    UniProt: Q8IUH4

  • Chr Location
    11p15.1; chr11:19117099-19176422 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with Zdhhc13 mouse models

Human Disease Mouse Models
      
IDs
 View 1 model
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    50 phenotypes from 2 alleles in 4 genetic backgrounds
    6 images
    19 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for an ENU mutation display wasting, weight loss, hair loss (alopecia), reduced bone mineral density (osteoporosis), and generalized amyloid deposition, which resulted in early death.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    18
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    779
  • Tissues
    39
  • cDNA Data
    38
  • Literature Summary
    8
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 243983 NCBI Gene Model | MGI Sequence Detail 38438 C57BL/6J ±  kb
    transcript NM_028031 RefSeq | MGI Sequence Detail 2407 C57BL/6  
    polypeptide Q9CWU2 UniProt | EBI | MGI Sequence Detail 622 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 40
      cDNA 38
      Primer pair 2

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:2671602
    References
    more
    • Summaries
      All 54
      Developmental Gene Expression 8
      Diseases 1
      Gene Ontology 8
      Phenotypes 19
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory