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Prelid3b Gene Detail
Summary
  • Symbol
    Prelid3b
  • Name
    PRELI domain containing 3B
  • Synonyms
    2310042G06Rik, Slmo2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913640
    NCBI Gene: 66390
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:174306884-174314734 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 97.96 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    317 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913640
 protein coding gene Chr2:174306860-174314874 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026970
 protein coding gene Chr2:180825346-180833171 (-)
A/J MGP_AJ_G0026937
 protein coding gene Chr2:173204196-173212032 (-)
AKR/J MGP_AKRJ_G0026908
 protein coding gene Chr2:178419785-178427612 (-)
BALB/cJ MGP_BALBcJ_G0026946
 protein coding gene Chr2:173601221-173609043 (-)
C3H/HeJ MGP_C3HHeJ_G0026688
 protein coding gene Chr2:178799736-178807583 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027393
 protein coding gene Chr2:186017122-186026591 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024762
 protein coding gene Chr2:166439223-166447081 (-)
CAST/EiJ MGP_CASTEiJ_G0026147
 protein coding gene Chr2:179528653-179538261 (-)
CBA/J MGP_CBAJ_G0026665
 protein coding gene Chr2:192950626-192958451 (-)
DBA/2J MGP_DBA2J_G0026803
 protein coding gene Chr2:172302937-172310786 (-)
FVB/NJ MGP_FVBNJ_G0026769
 protein coding gene Chr2:170926704-170934540 (-)
LP/J MGP_LPJ_G0026904
 protein coding gene Chr2:180737256-180745085 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026788
 protein coding gene Chr2:195842056-195850935 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027450
 protein coding gene Chr2:178448864-178456736 (-)
PWK/PhJ MGP_PWKPhJ_G0025883
 protein coding gene Chr2:172117690-172125807 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025683
 protein coding gene Chr2:177496882-177504691 (-)
WSB/EiJ MGP_WSBEiJ_G0026219
 protein coding gene Chr2:179412951-179420790 (-)



Homology
more
  • Human Ortholog
    PRELID3B, PRELI domain containing 3B
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRELID3B, PRELI domain containing 3B
  • Synonyms
    C20orf45, dJ543J19.5, SLMO2, UPS2
  • Links
    NCBI Gene ID: 51012
    neXtProt AC: NX_Q9Y3B1
    UniProt: Q9Y3B1

  • Chr Location
    20q13.32; chr20:59033145-59042809 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    88
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66390 NCBI Gene Model | MGI Sequence Detail 7851 C57BL/6J ±  kb
transcript NM_025531 RefSeq | MGI Sequence Detail 1403 FVB/N  
polypeptide Q9CYY7 UniProt | EBI | MGI Sequence Detail 195 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 88
    cDNA 88

    Microarray probesets 3
Other
Accession IDs
less
MGI:2138738
References
more
  • Summaries
    All 26
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:151002 Pagliarini DJ, et al., A mitochondrial protein compendium elucidates complex I disease biology. Cell. 2008 Jul 11;134(1):112-23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory