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Acbd6 Gene Detail
Summary
  • Symbol
    Acbd6
  • Name
    acyl-Coenzyme A binding domain containing 6
  • Synonyms
    0610010G04Rik, 2610100E10Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919732
    NCBI Gene: 72482
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:155433845-155564120 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 66.92 cM, cytoband G3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    3266 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919732
 protein coding gene Chr1:155433845-155567076 (+)
129S1/SvImJ MGP_129S1SvImJ_G0016614
 protein coding gene Chr1:160488794-160628612 (+)
A/J MGP_AJ_G0016595
 protein coding gene Chr1:154041995-154180310 (+)
AKR/J MGP_AKRJ_G0016561
 protein coding gene Chr1:158783480-158916866 (+)
BALB/cJ MGP_BALBcJ_G0016556
 protein coding gene Chr1:154554623-154687788 (+)
C3H/HeJ MGP_C3HHeJ_G0016380
 protein coding gene Chr1:158906278-159041166 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017017
 protein coding gene Chr1:166008586-166144467 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014726
 protein coding gene Chr1:146266643-146407578 (+)
CAST/EiJ MGP_CASTEiJ_G0015960
 protein coding gene Chr1:158431016-158566968 (+)
CBA/J MGP_CBAJ_G0016355
 protein coding gene Chr1:171849308-171988411 (+)
DBA/2J MGP_DBA2J_G0016461
 protein coding gene Chr1:153017358-153150326 (+)
FVB/NJ MGP_FVBNJ_G0016459
 protein coding gene Chr1:151485311-151617717 (+)
LP/J MGP_LPJ_G0016532
 protein coding gene Chr1:161636558-161774370 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016484
 protein coding gene Chr1:179439880-179582219 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017053
 protein coding gene Chr1:158584914-158720667 (+)
PWK/PhJ MGP_PWKPhJ_G0015746
 protein coding gene Chr1:152088614-152224290 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015533
 protein coding gene Chr1:157320988-157461842 (+)
WSB/EiJ MGP_WSBEiJ_G0016022
 protein coding gene Chr1:158658741-158801648 (+)



Homology
more
  • Human Ortholog
    ACBD6, acyl-CoA binding domain containing 6
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ACBD6, acyl-CoA binding domain containing 6
  • Synonyms
    NEDPM
  • Links
    NCBI Gene ID: 84320
    neXtProt AC: NX_Q9BR61
    UniProt: Q9BR61

  • Chr Location
    1q25.2-q25.3; chr1:180269653-180502954 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    12
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 72482 NCBI Gene Model | MGI Sequence Detail 130276 C57BL/6J ±  kb
transcript NM_028250 RefSeq | MGI Sequence Detail 1504 C57BL/6  
polypeptide Q9D061 UniProt | EBI | MGI Sequence Detail 282 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 4
Other
Accession IDs
less
MGI:1915591
References
more
  • Summaries
    All 32
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory