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Ribc1 Gene Detail
Summary
  • Symbol
    Ribc1
  • Name
    RIB43A domain with coiled-coils 1
  • Synonyms
    2610028I09Rik, W08639
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913861
    NCBI Gene: 66611
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:150787578-150799291 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 68.46 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    260 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913861
 protein coding gene ChrX:150787576-150799884 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036181
 protein coding gene ChrX:149759810-149771524 (-)
A/J MGP_AJ_G0036157
 protein coding gene ChrX:148949459-148961089 (-)
AKR/J MGP_AKRJ_G0036083
 protein coding gene ChrX:153777653-153789356 (-)
BALB/cJ MGP_BALBcJ_G0036148
 protein coding gene ChrX:147141879-147153463 (-)
C3H/HeJ MGP_C3HHeJ_G0035856
 protein coding gene ChrX:149964954-149977640 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036673
 protein coding gene ChrX:154025973-154037483 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033497
 protein coding gene ChrX:140642849-140655337 (-)
CAST/EiJ MGP_CASTEiJ_G0035147
 protein coding gene ChrX:129382288-129393892 (-)
CBA/J MGP_CBAJ_G0035833
 protein coding gene ChrX:158551735-158565861 (-)
DBA/2J MGP_DBA2J_G0035991
 protein coding gene ChrX:148023553-148035240 (-)
FVB/NJ MGP_FVBNJ_G0035925
 protein coding gene ChrX:147152050-147163778 (-)
LP/J MGP_LPJ_G0036082
 protein coding gene ChrX:150853649-150865316 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035961
 protein coding gene ChrX:166715123-166726819 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036708
 protein coding gene ChrX:149274532-149287317 (-)
PWK/PhJ MGP_PWKPhJ_G0034841
 protein coding gene ChrX:126333790-126345810 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034667
 protein coding gene ChrX:129843456-129857260 (-)
WSB/EiJ MGP_WSBEiJ_G0035282
 protein coding gene ChrX:147338214-147349869 (-)



Homology
more
  • Human Ortholog
    RIBC1, RIB43A domain with coiled-coils 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RIBC1, RIB43A domain with coiled-coils 1
  • Synonyms
    2610028I09Rik
  • Links
    NCBI Gene ID: 158787
    neXtProt AC: NX_Q8N443
    UniProt: Q8N443

  • Chr Location
    Xp11.22; chrX:53422690-53431120 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000025257 Ensembl Gene Model | MGI Sequence Detail 11714 C57BL/6J ±  kb
transcript ENSMUST00000026288 Ensembl | MGI Sequence Detail 1508 Not Applicable  
polypeptide ENSMUSP00000026288 Ensembl | MGI Sequence Detail 379 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 2
Other
Accession IDs
less
MGI:1926941
References
more
  • Summaries
    All 25
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:64708 Tsuchiya KD, et al., Chromosomal domains and escape from X inactivation: comparative X inactivation analysis in mouse and human. Mamm Genome. 2000 Oct;11(10):849-54
  • Latest
    J:338030 Zhou L, et al., Structures of sperm flagellar doublet microtubules expand the genetic spectrum of male infertility. Cell. 2023 Jun 22;186(13):2897-2910.e19
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory