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Cfap68 Gene Detail
Summary
  • Symbol
    Cfap68
  • Name
    cilia and flagella associated protein 68
  • Synonyms
    1110032A03Rik, 4930500N06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915971
    NCBI Gene: 68721
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:50672674-50679536 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 27.75 cM, cytoband B
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    305 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915971
 protein coding gene Chr9:50672674-50686820 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034790
 protein coding gene Chr9:49664838-49677910 (-)
A/J MGP_AJ_G0034771
 protein coding gene Chr9:48150910-48163231 (-)
AKR/J MGP_AKRJ_G0034699
 protein coding gene Chr9:49160338-49173061 (-)
BALB/cJ MGP_BALBcJ_G0034763
 protein coding gene Chr9:47875136-47887533 (-)
C3H/HeJ MGP_C3HHeJ_G0034473
 protein coding gene Chr9:49650437-49664975 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035283
 protein coding gene Chr9:51048916-51062597 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032196
 protein coding gene Chr9:47611210-47624088 (-)
CAST/EiJ MGP_CASTEiJ_G0033795
 protein coding gene Chr9:49598775-49612056 (-)
CBA/J MGP_CBAJ_G0034445
 protein coding gene Chr9:52854819-52868687 (-)
DBA/2J MGP_DBA2J_G0034604
 protein coding gene Chr9:48009159-48021510 (-)
FVB/NJ MGP_FVBNJ_G0034545
 protein coding gene Chr9:47224463-47236897 (-)
LP/J MGP_LPJ_G0034685
 protein coding gene Chr9:50023707-50036743 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034588
 protein coding gene Chr9:54450750-54464875 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035304
 protein coding gene Chr9:49143166-49154918 (-)
PWK/PhJ MGP_PWKPhJ_G0033500
 protein coding gene Chr9:47986851-47999629 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033335
 protein coding gene Chr9:49447267-49460811 (-)
WSB/EiJ MGP_WSBEiJ_G0033908
 protein coding gene Chr9:49145841-49158612 (-)



Homology
more
  • Human Ortholog
    CFAP68, cilia and flagella associated protein 68
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CFAP68, cilia and flagella associated protein 68
  • Synonyms
    C11orf1
  • Links
    NCBI Gene ID: 64776
    neXtProt AC: NX_Q9H5F2
    UniProt: Q9H5F2

  • Chr Location
    11q23.1; chr11:111878935-111885975 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    7 phenotype references
Male mice homozygous for a null allele exhibit normal fertility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    4
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    834
  • Tissues
    47
  • cDNA Data
    11
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 68721 NCBI Gene Model | MGI Sequence Detail 6863 C57BL/6J ±  kb
    transcript NM_023483 RefSeq | MGI Sequence Detail 3285 C57BL/6  
    polypeptide Q9D131 UniProt | EBI | MGI Sequence Detail 166 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 11
      cDNA 11

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:1922210, MGI:7380602
    References
    more
    • Summaries
      All 34
      Developmental Gene Expression 1
      Gene Ontology 4
      Phenotypes 7
    • Earliest
      J:74598 O'Brien KP, et al., Characterization of five novel human genes in the 11q13-q22 region. Biochem Biophys Res Commun. 2000 Jun 24;273(1):90-4
    • Latest
      J:348447 Nguyen TTT, et al., Gene-deficient mouse model established by CRISPR/Cas9 system reveals 15 reproductive organ-enriched genes dispensable for male fertility. Frontiers in Cell and Developmental Biology. 2024;12
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/05/2024
    MGI 6.24     		The Jackson Laboratory