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Saal1 Gene Detail
Summary
  • Symbol
    Saal1
  • Name
    serum amyloid A-like 1
  • Synonyms
    5031425D22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926185
    NCBI Gene: 78935
  • Member of
    Saa cluster
  • Alliance
    gene page
  • Transcription Start Sites
    12 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:46336581-46360085 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 30.48 cM, cytoband B3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    860 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926185
 protein coding gene Chr7:46335532-46360104 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032267
 protein coding gene Chr7:47074827-47101186 (-)
A/J MGP_AJ_G0032246
 protein coding gene Chr7:46094729-46131183 (-)
AKR/J MGP_AKRJ_G0032182
 protein coding gene Chr7:47394620-47418734 (-)
BALB/cJ MGP_BALBcJ_G0032258
 protein coding gene Chr7:46107167-46131434 (-)
C3H/HeJ MGP_C3HHeJ_G0031973
 protein coding gene Chr7:47892440-47916652 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032750
 protein coding gene Chr7:49346570-49372537 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029764
 protein coding gene Chr7:48650263-48672279 (-)
CAST/EiJ MGP_CASTEiJ_G0031301
 protein coding gene Chr7:39337043-39360766 (-)
CBA/J MGP_CBAJ_G0031938
 protein coding gene Chr7:50994731-51025429 (-)
DBA/2J MGP_DBA2J_G0032095
 protein coding gene Chr7:45787336-45811703 (-)
FVB/NJ MGP_FVBNJ_G0032047
 protein coding gene Chr7:45583843-45608801 (-)
LP/J MGP_LPJ_G0032174
 protein coding gene Chr7:47765963-47797173 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032084
 protein coding gene Chr7:49609269-49633218 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032765
 protein coding gene Chr7:46612895-46639449 (-)
PWK/PhJ MGP_PWKPhJ_G0031024
 protein coding gene Chr7:39166844-39190973 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030862
 protein coding gene Chr7:34633343-34660875 (-)
WSB/EiJ MGP_WSBEiJ_G0031419
 protein coding gene Chr7:47120103-47143079 (-)



Homology
more
  • Human Ortholog
    SAAL1, serum amyloid A like 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SAAL1, serum amyloid A like 1
  • Synonyms
    SPACIA1
  • Links
    NCBI Gene ID: 113174
    neXtProt AC: NX_Q96ER3
    UniProt: Q96ER3

  • Chr Location
    11p15.1; chr11:18069935-18106087 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    61
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 78935 NCBI Gene Model | MGI Sequence Detail 23505 C57BL/6J ±  kb
transcript NR_185017 RefSeq | MGI Sequence Detail 3714 C57BL/6  
polypeptide Q9D2C2 UniProt | EBI | MGI Sequence Detail 474 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 61
    cDNA 61

    Microarray probesets 5
References
more
  • Summaries
    All 33
    Gene Ontology 3
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:355692 Han Y, et al., Citrullinated fibrinogen-SAAs complex causes vascular metastagenesis. Nat Commun. 2023 Aug 24;14(1):4960
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory