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Ttpal Gene Detail
Summary
  • Symbol
    Ttpal
  • Name
    tocopherol (alpha) transfer protein-like
  • Synonyms
    3110080A02Rik, 5830472M02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923330
    NCBI Gene: 76080
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:163444234-163460933 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 84.37 cM, cytoband H3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    662 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923330
 protein coding gene Chr2:163444206-163460933 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026826
 protein coding gene Chr2:168957793-168976224 (+)
A/J MGP_AJ_G0026792
 protein coding gene Chr2:162144644-162161651 (+)
AKR/J MGP_AKRJ_G0026763
 protein coding gene Chr2:166937900-166954467 (+)
BALB/cJ MGP_BALBcJ_G0026801
 protein coding gene Chr2:162470801-162486107 (+)
C3H/HeJ MGP_C3HHeJ_G0026543
 protein coding gene Chr2:167289528-167310344 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027249
 protein coding gene Chr2:173882206-173903217 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024619
 protein coding gene Chr2:155447714-155464262 (+)
CAST/EiJ MGP_CASTEiJ_G0026004
 protein coding gene Chr2:167684796-167702079 (+)
CBA/J MGP_CBAJ_G0026520
 protein coding gene Chr2:180168591-180185089 (+)
DBA/2J MGP_DBA2J_G0026658
 protein coding gene Chr2:161313516-161330405 (+)
FVB/NJ MGP_FVBNJ_G0026624
 protein coding gene Chr2:159685911-159702708 (+)
LP/J MGP_LPJ_G0026761
 protein coding gene Chr2:169083414-169099861 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026646
 protein coding gene Chr2:183822361-183838860 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027305
 protein coding gene Chr2:166832411-166849551 (+)
PWK/PhJ MGP_PWKPhJ_G0025738
 protein coding gene Chr2:160875010-160893015 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025541
 protein coding gene Chr2:165702645-165720746 (+)
WSB/EiJ MGP_WSBEiJ_G0026074
 protein coding gene Chr2:167684011-167701082 (+)



Homology
more
  • Human Ortholog
    TTPAL, alpha tocopherol transfer protein like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TTPAL, alpha tocopherol transfer protein like
  • Synonyms
    C20orf121
  • Links
    NCBI Gene ID: 79183
    neXtProt AC: NX_Q9BTX7
    UniProt: Q9BTX7

  • Chr Location
    20q13.12; chr20:44475874-44494603 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    76
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000017679 Ensembl Gene Model | MGI Sequence Detail 16700 C57BL/6J ±  kb
transcript ENSMUST00000171696 Ensembl | MGI Sequence Detail 4522 Not Applicable  
polypeptide ENSMUSP00000128922 Ensembl | MGI Sequence Detail 343 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 76
    cDNA 76

    Microarray probesets 3
Other
Accession IDs
less
MGI:1920474
References
more
  • Summaries
    All 27
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory