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Fam13c Gene Detail
Summary
  • Symbol
    Fam13c
  • Name
    family with sequence similarity 13, member C
  • Synonyms
    1200015N20Rik, C030038O19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918971
    NCBI Gene: 71721
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:70276311-70394566 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 36.68 cM, cytoband B5.2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    3446 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918971
 protein coding gene Chr10:70274981-70394566 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017338
 protein coding gene Chr10:70381500-70502845 (+)
A/J MGP_AJ_G0017315
 protein coding gene Chr10:67985966-68104993 (+)
AKR/J MGP_AKRJ_G0017276
 protein coding gene Chr10:69844002-69960195 (+)
BALB/cJ MGP_BALBcJ_G0017275
 protein coding gene Chr10:68187457-68303013 (+)
C3H/HeJ MGP_C3HHeJ_G0017099
 protein coding gene Chr10:69856616-69987845 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017733
 protein coding gene Chr10:72922206-73045334 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015423
 protein coding gene Chr10:64600481-64712622 (+)
CAST/EiJ MGP_CASTEiJ_G0016669
 protein coding gene Chr10:70009592-70133375 (+)
CBA/J MGP_CBAJ_G0017071
 protein coding gene Chr10:75736755-75871976 (+)
DBA/2J MGP_DBA2J_G0017176
 protein coding gene Chr10:67337184-67454547 (+)
FVB/NJ MGP_FVBNJ_G0017169
 protein coding gene Chr10:66515771-66630916 (+)
LP/J MGP_LPJ_G0017249
 protein coding gene Chr10:70842613-70966654 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017197
 protein coding gene Chr10:77824385-77954233 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017772
 protein coding gene Chr10:69793884-69915361 (+)
PWK/PhJ MGP_PWKPhJ_G0016453
 protein coding gene Chr10:67195801-67317936 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016235
 protein coding gene Chr10:69177558-69301975 (+)
WSB/EiJ MGP_WSBEiJ_G0016733
 protein coding gene Chr10:69733316-69874086 (+)



Homology
more
  • Human Ortholog
    FAM13C, family with sequence similarity 13 member C
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FAM13C, family with sequence similarity 13 member C
  • Synonyms
    FAM13C1
  • Links
    NCBI Gene ID: 220965
    neXtProt AC: NX_Q8NE31
    UniProt: Q8NE31

  • Chr Location
    10q21.1; chr10:59246129-59363181 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    750
  • Tissues
    4
  • cDNA Data
    29
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000043259 Ensembl Gene Model | MGI Sequence Detail 118256 C57BL/6J ±  kb
transcript ENSMUST00000062883 Ensembl | MGI Sequence Detail 3262 Not Applicable  
polypeptide ENSMUSP00000051375 Ensembl | MGI Sequence Detail 601 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 36
    Genomic 1
    cDNA 35

    Microarray probesets 5
Other
Accession IDs
less
MGI:1924739
References
more
  • Summaries
    All 36
    Developmental Gene Expression 1
    Phenotypes 13
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory