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Ssna1 Gene Detail
Summary
  • Symbol
    Ssna1
  • Name
    SS nuclear autoantigen 1
  • Synonyms
    1110003H09Rik, 1190004J23Rik, N14, NA14
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915725
    NCBI Gene: 68475
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:25161051-25162430 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 17.12 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915725
 protein coding gene Chr2:25161051-25162450 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025434
 protein coding gene Chr2:23138925-23140324 (-)
A/J MGP_AJ_G0025411
 protein coding gene Chr2:22250183-22251582 (-)
AKR/J MGP_AKRJ_G0025381
 protein coding gene Chr2:22993854-22995253 (-)
BALB/cJ MGP_BALBcJ_G0025407
 protein coding gene Chr2:22360869-22362268 (-)
C3H/HeJ MGP_C3HHeJ_G0025168
 protein coding gene Chr2:22920470-22921869 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025851
 protein coding gene Chr2:23873910-23875309 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023262
 protein coding gene Chr2:21166573-21167987 (-)
CAST/EiJ MGP_CASTEiJ_G0024631
 protein coding gene Chr2:22802562-22803961 (-)
CBA/J MGP_CBAJ_G0025146
 protein coding gene Chr2:24707155-24708554 (-)
DBA/2J MGP_DBA2J_G0025279
 protein coding gene Chr2:22091974-22093373 (-)
FVB/NJ MGP_FVBNJ_G0025241
 protein coding gene Chr2:21832907-21834306 (-)
LP/J MGP_LPJ_G0025365
 protein coding gene Chr2:23083772-23085171 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025272
 protein coding gene Chr2:24911518-24912917 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025910
 protein coding gene Chr2:22940635-22942034 (-)
PWK/PhJ MGP_PWKPhJ_G0024379
 protein coding gene Chr2:21904168-21905568 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024179
 protein coding gene Chr2:23096813-23098234 (-)
WSB/EiJ MGP_WSBEiJ_G0024700
 protein coding gene Chr2:23009446-23010845 (-)



Homology
more
  • Human Ortholog
    SSNA1, SS nuclear autoantigen 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SSNA1, SS nuclear autoantigen 1
  • Synonyms
    N14, NA-14, NA14
  • Links
    NCBI Gene ID: 8636
    neXtProt AC: NX_O43805
    UniProt: O43805

  • Chr Location
    9q34.3; chr9:137188660-137190370 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    38
  • GO References
    10
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    93
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68475 NCBI Gene Model | MGI Sequence Detail 1380 C57BL/6J ±  kb
transcript NM_023464 RefSeq | MGI Sequence Detail 864 C57BL/6  
polypeptide Q9JJ94 UniProt | EBI | MGI Sequence Detail 119 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 93
    cDNA 93

    Microarray probesets 3
Other
Accession IDs
less
MGI:1916163, MGI:2138807
References
more
  • Summaries
    All 38
    Gene Ontology 10
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:269674 Basnet N, et al., Direct induction of microtubule branching by microtubule nucleation factor SSNA1. Nat Cell Biol. 2018 Oct;20(10):1172-1180
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory