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Cyth1 Gene Detail
Summary
  • Symbol
    Cyth1
  • Name
    cytohesin 1
  • Synonyms
    CLM1, CTH-1, Pscd1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1334257
    NCBI Gene: 19157
  • Alliance
    gene page
  • Transcription Start Sites
    20 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:118054996-118139452 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 82.96 cM, cytoband E2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2010 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1334257
 protein coding gene Chr11:118022845-118139452 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019462
 protein coding gene Chr11:122446031-122569375 (-)
A/J MGP_AJ_G0019430
 protein coding gene Chr11:117014235-117132332 (-)
AKR/J MGP_AKRJ_G0019400
 protein coding gene Chr11:120565399-120685716 (-)
BALB/cJ MGP_BALBcJ_G0019405
 protein coding gene Chr11:117377879-117495118 (-)
C3H/HeJ MGP_C3HHeJ_G0019211
 protein coding gene Chr11:120868499-120987755 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019854
 protein coding gene Chr11:126190606-126312340 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017479
 protein coding gene Chr11:114024192-114141348 (-)
CAST/EiJ MGP_CASTEiJ_G0018765
 protein coding gene Chr11:122289298-122413244 (-)
CBA/J MGP_CBAJ_G0019182
 protein coding gene Chr11:131128752-131249817 (-)
DBA/2J MGP_DBA2J_G0019294
 protein coding gene Chr11:116403882-116521152 (-)
FVB/NJ MGP_FVBNJ_G0019286
 protein coding gene Chr11:116041993-116160227 (-)
LP/J MGP_LPJ_G0019364
 protein coding gene Chr11:122763265-122882348 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019319
 protein coding gene Chr11:130090067-130214306 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019893
 protein coding gene Chr11:121225376-121343455 (-)
PWK/PhJ MGP_PWKPhJ_G0018531
 protein coding gene Chr11:117772735-117889439 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018323
 protein coding gene Chr11:120946254-121065928 (-)
WSB/EiJ MGP_WSBEiJ_G0018817
 protein coding gene Chr11:121188523-121309292 (-)



Homology
more
  • Human Ortholog
    CYTH1, cytohesin 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CYTH1, cytohesin 1
  • Synonyms
    B2-1, CYTOHESIN-1, D17S811E, PSCD1, SEC7
  • Links
    NCBI Gene ID: 9267
    neXtProt AC: NX_Q15438
    UniProt: Q15438

  • Chr Location
    17q25.3; chr17:78674048-78782297 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 2 alleles in 2 genetic backgrounds
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a gene trap allele exhibit normal brain morphology and long term potentiation. Mice homozygous for a knock-out allele exhibit decreased myelin sheath thickness due to hypomyelination.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    731
  • Tissues
    8
  • cDNA Data
    69
  • Literature Summary
    4
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 19157 NCBI Gene Model | MGI Sequence Detail 84457 C57BL/6J ±  kb
transcript NR_166155 RefSeq | MGI Sequence Detail 5937 C57BL/6  
polypeptide Q9QX11 UniProt | EBI | MGI Sequence Detail 398 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 70
    cDNA 69
    Primer pair 1

    Microarray probesets 6
References
more
  • Summaries
    All 44
    Developmental Gene Expression 4
    Gene Ontology 9
    Phenotypes 6
  • Earliest
    J:49556 Kim HS, et al., Complex regulation of multiple cytohesin-like genes in murine tissues and cells. FEBS Lett. 1998 Aug 21;433(3):312-6
  • Latest
    J:357385 Song R, et al., A natural loss-of-function deletion of the cytohesin 1 (Cyth1) gene in BALB/cByJ mice does not impact cardiomyocyte polyploidy. Sci Rep. 2024 Jun 10;14(1):13333
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory