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Srpx Gene Detail
Summary
  • Symbol
    Srpx
  • Name
    sushi-repeat-containing protein
  • Synonyms
    drs-1, drs-2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1858306
    NCBI Gene: 51795
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:9904216-9983879 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 4.62 cM, cytoband A1.2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1864 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1858306
 protein coding gene ChrX:9904216-9983948 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035561
 protein coding gene ChrX:4776876-4857870 (-)
A/J MGP_AJ_G0035538
 protein coding gene ChrX:4877493-4956971 (-)
AKR/J MGP_AKRJ_G0035470
 protein coding gene ChrX:4954179-5027613 (-)
BALB/cJ MGP_BALBcJ_G0035531
 protein coding gene ChrX:4795438-4875952 (-)
C3H/HeJ MGP_C3HHeJ_G0035248
 protein coding gene ChrX:4898157-4985393 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036061
 protein coding gene ChrX:4850623-4933353 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032930
 protein coding gene ChrX:3984870-4063665 (-)
CAST/EiJ MGP_CASTEiJ_G0034540
 protein coding gene ChrX:4595898-4677609 (-)
CBA/J MGP_CBAJ_G0035217
 protein coding gene ChrX:5237062-5325707 (-)
DBA/2J MGP_DBA2J_G0035370
 protein coding gene ChrX:4793983-4875335 (-)
FVB/NJ MGP_FVBNJ_G0035317
 protein coding gene ChrX:4635547-4717373 (-)
LP/J MGP_LPJ_G0035452
 protein coding gene ChrX:4966186-5057273 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035360
 protein coding gene ChrX:5112551-5206147 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036073
 protein coding gene ChrX:4703189-4787003 (-)
PWK/PhJ MGP_PWKPhJ_G0034241
 protein coding gene ChrX:4293982-4375025 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034082
 protein coding gene ChrX:4759602-4843886 (-)
WSB/EiJ MGP_WSBEiJ_G0034676
 protein coding gene ChrX:4777808-4860439 (-)



Homology
more
  • Human Ortholog
    SRPX, sushi repeat containing protein X-linked
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SRPX, sushi repeat containing protein X-linked
  • Synonyms
    DRS, ETX1, HEL-S-83p, SRPX1
  • Links
    NCBI Gene ID: 8406
    neXtProt AC: NX_P78539
    UniProt: P78539

  • Chr Location
    Xp11.4; chrX:38149336-38220924 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotypes from 1 allele in 1 genetic background
    5 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice either heterozygous or homozygous for a knock-out allele display increased sensitivity to malignant tumor formation at 7-12 months of age. In addition, homozygotes exhibit atypical lymphocyte morphhology and splenomegaly.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    757
  • Tissues
    13
  • cDNA Data
    30
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 51795 NCBI Gene Model | MGI Sequence Detail 79664 C57BL/6J ±  kb
    transcript NM_016911 RefSeq | MGI Sequence Detail 2435 C57BL/6  
    polypeptide Q9R0M3 UniProt | EBI | MGI Sequence Detail 464 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 31
      cDNA 30
      Primer pair 1

      Microarray probesets 3
    References
    more
    • Summaries
      All 27
      Developmental Gene Expression 2
      Gene Ontology 4
      Phenotypes 5
    • Earliest
      J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
    • Latest
      J:237787 Liu X, et al., Decreased expression levels of Ifi genes is associated to the increased resistance to spontaneous arthritis disease in mice deficiency of IL-1RA. BMC Immunol. 2016 Aug 02;17(1):25
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/05/2024
    MGI 6.24     		The Jackson Laboratory