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Hs3st3b1 Gene Detail
Summary
  • Symbol
    Hs3st3b1
  • Name
    heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
  • Synonyms
    3-OST-3B, 3Ost3b, 3OST3B1, HS3ST3B1, m3-OST-3B
  • Feature Type
    protein coding gene
  • IDs
    MGI:1333853
    NCBI Gene: 54710
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:63776618-63813116 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 39.47 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    973 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1333853
 protein coding gene Chr11:63775519-63813116 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018469
 protein coding gene Chr11:64015772-64056236 (-)
A/J MGP_AJ_G0018438
 protein coding gene Chr11:61632730-61671390 (-)
AKR/J MGP_AKRJ_G0018407
 protein coding gene Chr11:63547054-63584611 (-)
BALB/cJ MGP_BALBcJ_G0018409
 protein coding gene Chr11:61908254-61944916 (-)
C3H/HeJ MGP_C3HHeJ_G0018222
 protein coding gene Chr11:63504806-63545289 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018861
 protein coding gene Chr11:65990261-66028982 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016505
 protein coding gene Chr11:58687767-58722806 (-)
CAST/EiJ MGP_CASTEiJ_G0017778
 protein coding gene Chr11:63672303-63722587 (-)
CBA/J MGP_CBAJ_G0018196
 protein coding gene Chr11:68869313-68910177 (-)
DBA/2J MGP_DBA2J_G0018305
 protein coding gene Chr11:61196328-61232952 (-)
FVB/NJ MGP_FVBNJ_G0018295
 protein coding gene Chr11:60847263-60884943 (-)
LP/J MGP_LPJ_G0018377
 protein coding gene Chr11:64551341-64588999 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018319
 protein coding gene Chr11:69811117-69851893 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018902
 protein coding gene Chr11:63708809-63747396 (-)
PWK/PhJ MGP_PWKPhJ_G0017552
 protein coding gene Chr11:61801071-61837361 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017342
 protein coding gene Chr11:63549349-63588305 (-)
WSB/EiJ MGP_WSBEiJ_G0017831
 protein coding gene Chr11:63323633-63362600 (-)



Homology
more
  • Human Ortholog
    HS3ST3B1, heparan sulfate-glucosamine 3-sulfotransferase 3B1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    HS3ST3B1, heparan sulfate-glucosamine 3-sulfotransferase 3B1
  • Synonyms
    3-OST-3B, 3OST3B1, h3-OST-3B
  • Links
    NCBI Gene ID: 9953
    neXtProt AC: NX_Q9Y662
    UniProt: Q9Y662

  • Chr Location
    17p12; chr17:14301081-14349404 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotypes from 1 allele in 1 genetic background
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    914
  • Tissues
    170
  • cDNA Data
    19
  • Literature Summary
    14
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000070407 Ensembl Gene Model | MGI Sequence Detail 36499 C57BL/6J ±  kb
    transcript ENSMUST00000094103 Ensembl | MGI Sequence Detail 4911 Not Applicable  
    polypeptide ENSMUSP00000091647 Ensembl | MGI Sequence Detail 390 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 24
      cDNA 20
      Primer pair 3
      Other 1

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:2144429, MGI:2144549
    References
    more
    • Summaries
      All 47
      Developmental Gene Expression 14
      Gene Ontology 7
      Phenotypes 12
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:353621 Patel VN, et al., Specific 3-O-sulfated heparan sulfate domains regulate salivary gland basement membrane metabolism and epithelial differentiation. Nat Commun. 2024 Aug 31;15(1):7584
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory