CGCCC TGGGGTAGGC GGGCACCTCC S GGAGAAAAGC TCGGGCATTC CCTCC S = C/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
---|---|---|---|---|---|---|---|---|
ss45543628 | mCV23634266 | ABI | CRAMUS_MOUSE | f | SNP | G | G | C |
ss135257800 | ENSMUSSNP1681744 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | C |
SNP Consensus Information | ||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
||||
rs31528793 | SNP | G | G | C |
Location: Chr3:67371315 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi13246 | CpG island 13246 | within coordinates | ||||||
Gfm1 | G elongation factor, mitochondrial 1 | within coordinates | ||||||
Lxn | latexin | 75 bp upstream | ||||||
Rr77720 | regulatory region 77720 | within coordinates | ||||||
Tssr33497 | transcription start site region 33497 | 355 bp upstream | ||||||
Tssr33498 | transcription start site region 33498 | 191 bp upstream | ||||||
Tssr33499 | transcription start site region 33499 | 157 bp upstream | ||||||
Tssr33500 | transcription start site region 33500 | 39 bp upstream | ||||||
Tssr33501 | transcription start site region 33501 | 152 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 08/21/2024 MGI 6.24 |
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