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CAST/EiJ Strain Detail
Summary
  • Strain Name
    CAST/EiJ
  • Attributes
    inbred strain, wild-derived
  • MGI ID
    MGI:2159793
  • Synonyms
    Castaneus Eicher
  • Collection
    DO/CC Founder
SNPs
more
SNP Profile Heat Map
  • SNP Calls Involving CAST/EiJ
    2,560,674,386 from dbSNP Build 142
  • Comparison Strains
    99
Associated
Mutations,
Markers,
and QTL
3 associated mutations
222 associated QTL
Allele Marker
Ahl6CAST/EiJ Ahl6
Ari4CAST/EiJ Ari4
Ari5CAST/EiJ Ari5
Ari7CAST/EiJ Ari7
Ari8CAST/EiJ Ari8
Ars13CAST/EiJ Ars13
Ars14CAST/EiJ Ars14
Ars15CAST/EiJ Ars15
Ars16CAST/EiJ Ars16
Ars17CAST/EiJ Ars17
Ars18CAST/EiJ Ars18
Ars19CAST/EiJ Ars19
Ars20CAST/EiJ Ars20
Ars21CAST/EiJ Ars21
Ars22CAST/EiJ Ars22
Ars23CAST/EiJ Ars23
Ars24CAST/EiJ Ars24
ArtlesCAST/EiJ Artles
Asprl2CAST/EiJ Asprl2
Asprl4CAST/EiJ Asprl4
Bccad1CAST/EiJ Bccad1
Bcdr1CAST/EiJ Bcdr1
Bcmd2CAST/EiJ Bcmd2
Bdln2CAST/Ei Bdln2
Bdlnq7CAST/EiJ Bdlnq7
Bmd1CAST/EiJ Bmd1
Bmd1aCAST/EiJ Bmd1a
Bmd1bCAST/EiJ Bmd1b
Bmd1cCAST/EiJ Bmd1c
Bmd2CAST/EiJ Bmd2
Bmd3CAST/EiJ Bmd3
Bmd4CAST/EiJ Bmd4
Bmd5CAST/EiJ Bmd5
Bmd13CAST/EiJ Bmd13
Bmd38CAST/EiJ Bmd38
Brwq1CAST/EiJ Brwq1
Bwfq1CAST/EiJ Bwfq1
Bwfq2CAST/EiJ Bwfq2
Bwq15CAST/EiJ Bwq15
Bwq16CAST/EiJ Bwq16
Bwq17CAST/EiJ Bwq17
Bwq18CAST/EiJ Bwq18
Cara1CAST/EiJ Cara1
Cara2CAST/EiJ Cara2
Cara3CAST/EiJ Cara3
Carfhg1CAST/EiJ Carfhg1
Carfhg2CAST/EiJ Carfhg2
Carp1CAST/EiJ Carp1
Carp2CAST/EiJ Carp2
Carp3CAST/EiJ Carp3
Cdtm1CAST/EiJ Cdtm1
Cdtm2CAST/EiJ Cdtm2
Chol6CAST/Ei Chol6
Col4a1m1CAST/EiJ Col4a1m1
Dob9CAST/EiJ Dob9
Dpc1CAST/EiJ Dpc1
Dpn1CAST/EiJ Dpn1
Era1CAST/EiJ Era1
Fatmq1CAST/EiJ Fatmq1
Fatmq2CAST/EiJ Fatmq2
Fatpad1CAST/EiJ Fatpad1
Fatpad2CAST/EiJ Fatpad2
Fatpad3CAST/EiJ Fatpad3
Fatpad4CAST/EiJ Fatpad4
Fatpad5CAST/EiJ Fatpad5
Fatpad6CAST/EiJ Fatpad6
Fatpad7CAST/EiJ Fatpad7
Feml1CAST/EiJ Feml1
Feml2CAST/EiJ Feml2
Feml3CAST/EiJ Feml3
Feml4CAST/EiJ Feml4
Gbvq1CAST/EiJ Gbvq1
Gf7CAST/EiJ Gf7
Gfpq1CAST/EiJ Gfpq1
Gipc3ahl5-CAST/EiJ Gipc3
Gwth1CAST/EiJ Gwth1
Gwth2CAST/EiJ Gwth2
Gwth3CAST/EiJ Gwth3
Gwth4CAST/EiJ Gwth4
Gwth5CAST/EiJ Gwth5
Gwth6CAST/EiJ Gwth6
Gwth7CAST/EiJ Gwth7
Hdl1CAST/EiJ Hdl1
Hdl2CAST/EiJ Hdl2
Hdl3CAST/EiJ Hdl3
Hdl4CAST/EiJ Hdl4
Hdlq12CAST/EiJ Hdlq12
Heal12CAST/EiJ Heal12
Heal13CAST/EiJ Heal13
Heal15CAST/EiJ Heal15
Heal23CAST/EiJ Heal23
Heal24CAST/EiJ Heal24
Heal25CAST/EiJ Heal25
Hivan1CAST/EiJ Hivan1
HrI1CAST/EiJ HrI1
Hrsq4CAST/EiJ Hrsq4
Hrsq8CAST/EiJ Hrsq8
Hrsq9CAST/EiJ Hrsq9
Hsm1CAST/EiJ Hsm1
Hwtf1CAST/EiJ Hwtf1
Hwtf2CAST/EiJ Hwtf2
Idd3CAST/EiJ Idd3
Igly1CAST/EiJ Igly1
Igly2CAST/EiJ Igly2
Igly4CAST/EiJ Igly4
Igly5CAST/EiJ Igly5
Igly6CAST/EiJ Igly6
Igly7CAST/EiJ Igly7
Igly8CAST/EiJ Igly8
Kcal1CAST/EiJ Kcal1
Kcal2CAST/EiJ Kcal2
Kcal3CAST/EiJ Kcal3
Kwq13CAST/EiJ Kwq13
Kwq14CAST/EiJ Kwq14
Kwq15CAST/EiJ Kwq15
Lith12CAST/EiJ Lith12
Lith13CAST/EiJ Lith13
Lith14CAST/EiJ Lith14
Lrdm1CAST/EiJ Lrdm1
Lrdm2CAST/EiJ Lrdm2
Lwq9CAST/EiJ Lwq9
Malrd1CAST/EiJ Malrd1
Mlh1fc1CAST/EiJ Mlh1fc1
Mlh1fc2CAST/EiJ Mlh1fc2
Mlh1fc3CAST/EiJ Mlh1fc3
Mnic1CAST/EiJ Mnic1
Mnic2CAST/EiJ Mnic2
Mnic3CAST/EiJ Mnic3
Mnif1CAST/EiJ Mnif1
Mnif2CAST/EiJ Mnif2
Mnif3CAST/EiJ Mnif3
Mobq5CAST/EiJ Mobq5
Mobq6CAST/EiJ Mobq6
Mobq7CAST/EiJ Mobq7
Mobq8CAST/EiJ Mobq8
Modvl2CAST/EiJ Modvl2
Mohg1CAST/EiJ Mohg1
Mohg2CAST/EiJ Mohg2
Mohg3CAST/EiJ Mohg3
Mohg4CAST/EiJ Mohg4
Mohg5CAST/EiJ Mohg5
Mohg6CAST/EiJ Mohg6
Mohg7CAST/EiJ Mohg7
Mohg8CAST/EiJ Mohg8
Mohg9CAST/EiJ Mohg9
Mopkd1CAST/EiJ Mopkd1
Mopkd2CAST/EiJ Mopkd2
Nihlr1CAST/EiJ Nihlr1
Nihls1CAST/EiJ Nihls1
Nociq4CAST/EiJ Nociq4
Ofdi2CAST/EiJ Ofdi2
Orgwt1CAST/EiJ Orgwt1
Orgwt2CAST/EiJ Orgwt2
Orgwt3CAST/EiJ Orgwt3
Orgwt4CAST/EiJ Orgwt4
Orgwt5CAST/EiJ Orgwt5
Orgwt6CAST/EiJ Orgwt6
Orgwt7CAST/EiJ Orgwt7
Orgwt8CAST/EiJ Orgwt8
Paasd1CAST/EiJ Paasd1
Pbsq1CAST/EiJ Pbsq1
Pbwg1.10CAST/EiJ Pbwg1.10
PlepCAST/EiJ Plep
Pstc6CAST/EiJ Pstc6
Rabt1CAST/EiJ Rabt1
Rd6m1CAST/EiJ Rd6m1
Recrq1CAST/EiJ Recrq1
Recrq2CAST/EiJ Recrq2
Recrq3CAST/EiJ Recrq3
Recrq4CAST/EiJ Recrq4
Recrq5CAST/EiJ Recrq5
Recrq6CAST/EiJ Recrq6
Recrq7CAST/EiJ Recrq7
RencdCAST/EiJ Rencd
Sccor1CAST/EiJ Sccor1
Sccor2CAST/EiJ Sccor2
ScholCAST/EiJ Schol
Slt1CAST/EiJ Slt1
Slt2CAST/EiJ Slt2
Slt3CAST/EiJ Slt3
Slt4CAST/EiJ Slt4
Slt5CAST/EiJ Slt5
Smdq1CAST/EiJ Smdq1
Smdq2CAST/EiJ Smdq2
Smdq3CAST/EiJ Smdq3
Stheal11CAST/EiJ Stheal11
Stheal12CAST/EiJ Stheal12
Stheal13CAST/EiJ Stheal13
Stheal14CAST/EiJ Stheal14
Stsl1CAST/EiJ Stsl1
Swq6CAST/EiJ Swq6
Syncl1CAST/EiJ Syncl1
Syncl2CAST/EiJ Syncl2
Syncl3CAST/EiJ Syncl3
TabwCAST/EiJ Tabw
TafatCAST/EiJ Tafat
Tailq7CAST/EiJ Tailq7
Tailq8CAST/EiJ Tailq8
Tanidd1CAST/EiJ Tanidd1
Tanidd3CAST/EiJ Tanidd3
Tcq1CAST/EiJ Tcq1
Tcq2CAST/EiJ Tcq2
Tcq10CAST/EiJ Tcq10
Tfv1CAST/EiJ Tfv1
Tglq7CAST/EiJ Tglq7
Tip1CAST/EiJ Tip1
Tip3CAST/EiJ Tip3
Tip4CAST/EiJ Tip4
Vpq1CAST/EiJ Vpq1
Vpq2CAST/EiJ Vpq2
Vpq3CAST/EiJ Vpq3
Wg1CAST/EiJ Wg1
Wg2CAST/EiJ Wg2
Wg2aCAST/EiJ Wg2a
Wg2bCAST/EiJ Wg2b
Wg2cCAST/EiJ Wg2c
Wg2dCAST/EiJ Wg2d
Wg3CAST/EiJ Wg3
Wg4CAST/EiJ Wg4
Wg5CAST/EiJ Wg5
Wg6CAST/EiJ Wg6
Wg7CAST/EiJ Wg7
Associated
Phenotypes
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
normal phenotype
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Find Mice (IMSR)
1 associated strain record at IMSR
IMSR Repository IMSR Strain Why Matched
JAX:000928 JAX CAST/EiJ exact match to ID
References
  • Earliest
    J:7560 Taylor BA, et al., Genes for serum amyloid A proteins map to Chromosome 7 in the mouse. Mol Gen Genet. 1984;195(3):491-9
  • All
    424
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory