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Zfp87 Gene Detail
Summary
  • Symbol
    Zfp87
  • Name
    zinc finger protein 87
  • Synonyms
    2210039O17Rik, 4631412O18Rik, KRAB4, Mzf22, Zfp72
  • Feature Type
    protein coding gene
  • IDs
    MGI:107768
    NCBI Gene: 170763
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr13:67663900-67674296 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 34.54 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    384 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_107768
 protein coding gene Chr13:67663900-67674350 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020715
 protein coding gene Chr13:67667565-67677955 (-)
A/J MGP_AJ_G0020670
 protein coding gene Chr13:65217845-65228242 (-)
AKR/J MGP_AKRJ_G0020645
 protein coding gene Chr13:67387474-67397864 (-)
BALB/cJ MGP_BALBcJ_G0020668
 protein coding gene Chr13:65702347-65712744 (-)
C3H/HeJ MGP_C3HHeJ_G0020462
 protein coding gene Chr13:67019315-67029712 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021104
 protein coding gene Chr13:70090180-70100576 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018676
 protein coding gene Chr13:62825180-62836024 (-)
CAST/EiJ MGP_CASTEiJ_G0019981
 protein coding gene Chr13:66274813-66285207 (-)
CBA/J MGP_CBAJ_G0020420
 protein coding gene Chr13:72551441-72561838 (-)
DBA/2J MGP_DBA2J_G0020546
 protein coding gene Chr13:65134049-65144446 (-)
FVB/NJ MGP_FVBNJ_G0020527
 protein coding gene Chr13:64128081-64140447 (-)
LP/J MGP_LPJ_G0020620
 protein coding gene Chr13:67927471-67937865 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020554
 protein coding gene Chr13:71384858-71395255 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021144
 protein coding gene Chr13:66632780-66643148 (-)
PWK/PhJ MGP_PWKPhJ_G0019736
 protein coding gene Chr13:64042844-64053360 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019559
 protein coding gene Chr13:63716891-63727289 (-)
WSB/EiJ MGP_WSBEiJ_G0020041
 protein coding gene Chr13:67120863-67131257 (-)



Homology
more
  • Human Ortholog
    ZNF28, zinc finger protein 28
  • Vertebrate Orthologs
    6
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZNF28, zinc finger protein 28
  • Synonyms
    KOX24
  • Links
    NCBI Gene ID: 7576
    neXtProt AC: NX_P17035
    UniProt: P17035

  • Chr Location
    19q13.41; chr19:52797408-52857600 (-)  GRCh38
  • Human Ortholog
    ZNF429, zinc finger protein 429
  • Links
    NCBI Gene ID: 353088
    neXtProt AC: NX_Q86V71
    UniProt: Q86V71

  • Chr Location
    19p12; chr19:21496682-21556270 (+)  GRCh38
  • Human Ortholog
    ZNF611, zinc finger protein 611
  • Links
    NCBI Gene ID: 81856
    neXtProt AC: NX_Q8N823
    UniProt: Q8N823

  • Chr Location
    19q13.41; chr19:52702813-52735073 (-)  GRCh38
  • Human Ortholog
    ZNF813, zinc finger protein 813
  • Links
    NCBI Gene ID: 126017
    neXtProt AC: NX_Q6ZN06
    UniProt: Q6ZN06

  • Chr Location
    19q13.42; chr19:53467733-53496255 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    815
  • Tissues
    65
  • cDNA Data
    10
  • Literature Summary
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097333 Ensembl Gene Model | MGI Sequence Detail 10397 C57BL/6J ±  kb
transcript ENSMUST00000181767 Ensembl | MGI Sequence Detail 2656 Not Applicable  
polypeptide ENSMUSP00000138087 Ensembl | MGI Sequence Detail 540 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    7 Sequences
  • InterPro Domains
    IPR050636 C2H2-type zinc finger domain-containing protein
    IPR050752 C2H2-type zinc-finger domain-containing protein
    IPR036051 KRAB domain superfamily
    IPR001909 Krueppel-associated box
    IPR050169 Krueppel C2H2-type zinc-finger
    IPR036236 Zinc finger C2H2 superfamily
    IPR013087 Zinc finger C2H2-type
Molecular
Reagents
less
  • All nucleic 12
    cDNA 11
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-36345, MGI:1925895, MGI:2445206
References
more
  • Summaries
    All 27
    Developmental Gene Expression 5
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory