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Zfp65 Gene Detail
Summary
  • Symbol
    Zfp65
  • Name
    zinc finger protein 65
  • Synonyms
    KRAB5, Zfp71-rs1
  • Feature Type
    protein coding gene
  • IDs
    MGI:107769
    NCBI Gene: 235907
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:67853428-67877238 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 34.70 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    722 from dbSNP Build 142
  • Strain Annotations
    17
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_107769
 protein coding gene Chr13:67853428-67877292 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020719
 protein coding gene Chr13:67869493-67896670 (-)
A/J MGP_AJ_G0020675
 protein coding gene Chr13:65456509-65473942 (-)
AKR/J MGP_AKRJ_G0020650
 protein coding gene Chr13:67629620-67656855 (-)
BALB/cJ MGP_BALBcJ_G0020673
 protein coding gene Chr13:65946250-65962292 (-)
C3H/HeJ MGP_C3HHeJ_G0020467
 protein coding gene Chr13:67244278-67261673 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021109
 protein coding gene Chr13:70290566-70323777 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018680
 protein coding gene Chr13:62928697-62973175 (-)
CAST/EiJ MGP_CASTEiJ_G0019985
 protein coding gene Chr13:66460183-66479629 (-)
CBA/J MGP_CBAJ_G0020425
 protein coding gene Chr13:72825267-72845870 (-)
DBA/2J MGP_DBA2J_G0020551
 protein coding gene Chr13:65335134-65354076 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0020624
 protein coding gene Chr13:68155684-68174800 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020559
 protein coding gene Chr13:71651167-71673317 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021149
 protein coding gene Chr13:66870293-66889382 (-)
PWK/PhJ MGP_PWKPhJ_G0019739
 protein coding gene Chr13:64190650-64233604 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019564
 protein coding gene Chr13:63912486-63932979 (-)
WSB/EiJ MGP_WSBEiJ_G0020044
 protein coding gene Chr13:67382035-67396879 (-)



Homology
more
  • Human Ortholog
    ZNF253, zinc finger protein 253
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZNF253, zinc finger protein 253
  • Synonyms
    BMZF-1, BMZF1, ZNF411
  • Links
    NCBI Gene ID: 56242
    neXtProt AC: NX_O75346
    UniProt: O75346

  • Chr Location
    19p13.11; chr19:19865830-19894674 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    782
  • Tissues
    55
  • cDNA Data
    26
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 235907 NCBI Gene Model | MGI Sequence Detail 23811 C57BL/6J ±  kb
transcript NM_001402906 RefSeq | MGI Sequence Detail 4088 ZRU/MplStud  
polypeptide NP_001389832 RefSeq | MGI Sequence Detail 400 ZRU/MplStud  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 27
    cDNA 26
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-36346
References
more
  • Summaries
    All 29
    Developmental Gene Expression 3
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:140465 Guo G, et al., Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. Dev Cell. 2010 Apr 20;18(4):675-85
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory