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Rpl6 Gene Detail
Summary
  • Symbol
    Rpl6
  • Name
    ribosomal protein L6
  • Synonyms
    Taxreb107
  • Feature Type
    protein coding gene
  • IDs
    MGI:108057
    NCBI Gene: 19988
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:121342564-121347304 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 61.72 cM, cytoband F
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    221 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_108057
 protein coding gene Chr5:121342544-121347304 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030023
 protein coding gene Chr5:124665007-124669775 (+)
A/J MGP_AJ_G0029988
 protein coding gene Chr5:119542183-119546947 (+)
AKR/J MGP_AKRJ_G0024353
 protein coding gene Chr18:45816861-45822632 (-)
BALB/cJ MGP_BALBcJ_G0029999
 protein coding gene Chr5:120922914-120929929 (+)
C3H/HeJ MGP_C3HHeJ_G0029717
 protein coding gene Chr5:123970395-123977445 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030452
 protein coding gene Chr5:129415278-129422200 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027678
 protein coding gene Chr5:114222291-114227002 (+)
CAST/EiJ MGP_CASTEiJ_G0029125
 protein coding gene Chr5:123074008-123079073 (+)
CBA/J MGP_CBAJ_G0029686
 protein coding gene Chr5:134494829-134499589 (+)
DBA/2J MGP_DBA2J_G0029836
 protein coding gene Chr5:119613324-119618631 (+)
FVB/NJ MGP_FVBNJ_G0029793
 protein coding gene Chr5:118557578-118562335 (+)
LP/J MGP_LPJ_G0029925
 protein coding gene Chr5:125187060-125194283 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029823
 protein coding gene Chr5:138382124-138387672 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030493
 protein coding gene Chr5:122906055-122911821 (+)
PWK/PhJ MGP_PWKPhJ_G0028839
 protein coding gene Chr5:118373228-118378854 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028676
 protein coding gene Chr5:120674917-120680603 (+)
WSB/EiJ MGP_WSBEiJ_G0029200
 protein coding gene Chr5:123578146-123583191 (+)



Homology
more
  • Human Ortholog
    RPL6, ribosomal protein L6
  • Vertebrate Orthologs
    5
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RPL6, ribosomal protein L6
  • Synonyms
    eL6, L6, SHUJUN-2, TAXREB107, TXREB1
  • Links
    NCBI Gene ID: 6128
    neXtProt AC: NX_Q02878
    UniProt: Q02878

  • Chr Location
    12q24.13; chr12:112405181-112418838 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    36
  • GO References
    11
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    738
  • Tissues
    21
  • cDNA Data
    894
  • Literature Summary
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 19988 NCBI Gene Model | MGI Sequence Detail 4741 C57BL/6J ±  kb
transcript NM_011290 RefSeq | MGI Sequence Detail 1282 C57BL/6  
polypeptide P47911 UniProt | EBI | MGI Sequence Detail 296 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 895
    cDNA 895

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-37093
References
more
  • Summaries
    All 48
    Developmental Gene Expression 6
    Gene Ontology 11
    Phenotypes 11
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:333015 Li H, et al., A male germ-cell-specific ribosome controls male fertility. Nature. 2022 Dec;612(7941):725-731
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory