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Chad Gene Detail
Summary
  • Symbol
    Chad
  • Name
    chondroadherin
  • Synonyms
    SLRR4A
  • Feature Type
    protein coding gene
  • IDs
    MGI:1096866
    NCBI Gene: 12643
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:94455873-94459953 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 58.90 cM
  • Mapping Data
    8 experiments
Strain
Comparison
more
  • SNPs within 2kb
    155 from dbSNP Build 142
  • Strain Annotations
    18
  • PCR
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1096866
 protein coding gene Chr11:94455873-94459953 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018962
 protein coding gene Chr11:96674666-96678745 (+)
A/J MGP_AJ_G0018930
 protein coding gene Chr11:92799283-92803362 (+)
AKR/J MGP_AKRJ_G0018900
 protein coding gene Chr11:95687629-95691708 (+)
BALB/cJ MGP_BALBcJ_G0018903
 protein coding gene Chr11:93250238-93254317 (+)
C3H/HeJ MGP_C3HHeJ_G0018717
 protein coding gene Chr11:95766566-95770645 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019355
 protein coding gene Chr11:99678316-99682396 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016986
 protein coding gene Chr11:90293108-90297206 (+)
CAST/EiJ MGP_CASTEiJ_G0018272
 protein coding gene Chr11:96486609-96490686 (+)
CBA/J MGP_CBAJ_G0018688
 protein coding gene Chr11:103829722-103833801 (+)
DBA/2J MGP_DBA2J_G0018796
 protein coding gene Chr11:92377872-92381952 (+)
FVB/NJ MGP_FVBNJ_G0018785
 protein coding gene Chr11:91796886-91804429 (+)
LP/J MGP_LPJ_G0018866
 protein coding gene Chr11:97213027-97217106 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018812
 protein coding gene Chr11:103838104-103842183 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019395
 protein coding gene Chr11:95914298-95918378 (+)
PWK/PhJ MGP_PWKPhJ_G0018042
 protein coding gene Chr11:93316905-93320987 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017832
 protein coding gene Chr11:95577958-95582048 (+)
WSB/EiJ MGP_WSBEiJ_G0018321
 protein coding gene Chr11:95799911-95803989 (+)



Homology
more
  • Human Ortholog
    CHAD, chondroadherin
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CHAD, chondroadherin
  • Synonyms
    SLRR4A
  • Links
    NCBI Gene ID: 1101
    neXtProt AC: NX_O15335
    UniProt: O15335

  • Chr Location
    17q21.33; chr17:50464496-50468906 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit widened epiphyseal growth plate, abnormal tracbecular and cortical bone morphology and lower femoral neck failure load and tibial strength.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    897
  • Tissues
    39
  • cDNA Data
    13
  • Literature Summary
    8
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 12643 NCBI Gene Model | MGI Sequence Detail 4081 C57BL/6J ±  kb
    transcript NM_007689 RefSeq | MGI Sequence Detail 1697 ZRU/MplStud  
    polypeptide O55226 UniProt | EBI | MGI Sequence Detail 358 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 16
      Genomic 1
      cDNA 13
      Primer pair 1
      Other 1

      Microarray probesets 3
    References
    more
    • Summaries
      All 40
      Developmental Gene Expression 8
      Diseases 1
      Gene Ontology 3
      Phenotypes 8
    • Earliest
      J:42830 Landgren C, et al., The mouse chondroadherin gene: characterization and chromosomal localization. Genomics. 1998 Jan 1;47(1):84-91
    • Latest
      J:321577 Yin W, et al., An essential function for autocrine hedgehog signaling in epithelial proliferation and differentiation in the trachea. Development. 2022 Feb 1;149(3):dev199804
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory