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Rps5 Gene Detail
Summary
  • Symbol
    Rps5
  • Name
    ribosomal protein S5
  • Synonyms
    S5 ribosomal protein
  • Feature Type
    protein coding gene
  • IDs
    MGI:1097682
    NCBI Gene: 20103
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:12656223-12660613 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 7.69 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    243 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1097682
 protein coding gene Chr7:12656217-12660613 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031656
 protein coding gene Chr7:10320273-10324669 (+)
A/J MGP_AJ_G0031629
 protein coding gene Chr7:10166589-10170985 (+)
AKR/J MGP_AKRJ_G0031552
 protein coding gene Chr7:10396814-10401203 (+)
BALB/cJ MGP_BALBcJ_G0031634
 protein coding gene Chr7:10279650-10284541 (+)
C3H/HeJ MGP_C3HHeJ_G0031356
 protein coding gene Chr7:10489353-10493749 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032098
 protein coding gene Chr7:10848059-10852455 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029192
 protein coding gene Chr7:11765160-11769588 (+)
CAST/EiJ MGP_CASTEiJ_G0030714
 protein coding gene Chr7:8049378-8053760 (+)
CBA/J MGP_CBAJ_G0031313
 protein coding gene Chr7:11058596-11062992 (+)
DBA/2J MGP_DBA2J_G0031471
 protein coding gene Chr7:10046625-10051021 (+)
FVB/NJ MGP_FVBNJ_G0031427
 protein coding gene Chr7:10043927-10048332 (+)
LP/J MGP_LPJ_G0031558
 protein coding gene Chr7:10412199-10416595 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031462
 protein coding gene Chr7:11147537-11151942 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032128
 protein coding gene Chr7:10176233-10180629 (+)
PWK/PhJ MGP_PWKPhJ_G0030442
 protein coding gene Chr7:8534003-8538432 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030268
 protein coding gene Chr7:6285594-6292958 (+)
WSB/EiJ MGP_WSBEiJ_G0030809
 protein coding gene Chr7:10197053-10201453 (+)



Homology
more
  • Human Ortholog
    RPS5, ribosomal protein S5
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RPS5, ribosomal protein S5
  • Synonyms
    S5, uS7
  • Links
    NCBI Gene ID: 6193
    neXtProt AC: NX_P46782
    UniProt: P46782

  • Chr Location
    19q13.43; chr19:58386400-58394806 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    35
  • GO References
    10
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    924
  • Tissues
    69
  • cDNA Data
    1065
  • Literature Summary
    8
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 20103 NCBI Gene Model | MGI Sequence Detail 4391 C57BL/6J ±  kb
transcript NM_001417226 RefSeq | MGI Sequence Detail 893 C57BL/6  
polypeptide P97461 UniProt | EBI | MGI Sequence Detail 204 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000014280 eukaryotic-type small ribosomal subunit protein uS7
    (term hierarchy)
  • PDB
    7CPU, 7CPV, 7LS1, 7LS2
  • InterPro Domains
    IPR005716 Ribosomal protein uS7, eukaryotic/archaeal
    IPR000235 Small ribosomal subunit protein uS7
    IPR020606 Small ribosomal subunit protein uS7, conserved site
    IPR023798 Small ribosomal subunit protein uS7 domain
    IPR036823 Small ribosomal subunit protein uS7 domain superfamily
  • GlyGen
    P97461 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 1067
    cDNA 1065
    Primer pair 1
    Other 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2145925
References
more
  • Summaries
    All 49
    Developmental Gene Expression 8
    Gene Ontology 10
    Phenotypes 9
  • Earliest
    J:40931 Vanegas N, et al., Cloning, sequencing and expression in MEL cells of a cDNA encoding the mouse ribosomal protein S5. Biochim Biophys Acta. 1997 Jun 5;1357(1):1-4
  • Latest
    J:354445 Susanto TT, et al., RAPIDASH: Tag-free enrichment of ribosome-associated proteins reveals composition dynamics in embryonic tissue, cancer cells, and macrophages. Mol Cell. 2024 Sep 19;84(18):3545-3563.e25
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory