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Muc17 Gene Detail
Summary
  • Symbol
    Muc17
  • Name
    mucin 17, cell surface associated
  • Synonyms
    Muc3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1203527
    NCBI Gene: 666339
  • Alliance
    gene page
  • Transcription Start Sites
    74 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:137163772-137202809 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 76.22 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1071 from dbSNP Build 142
  • Strain Annotations
    17
  • RFLP
    2
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1203527
 protein coding gene Chr5:137163770-137202830 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030218
 protein coding gene Chr5:141871760-141887454 (-)
A/J MGP_AJ_G0030186
 protein coding gene Chr5:135708682-135723479 (-)
AKR/J MGP_AKRJ_G0030119
 protein coding gene Chr5:140115912-140130283 (-)
BALB/cJ MGP_BALBcJ_G0030196
 protein coding gene Chr5:137070169-137084514 (-)
C3H/HeJ MGP_C3HHeJ_G0029912
 protein coding gene Chr5:140750276-140764643 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030648
 protein coding gene Chr5:147128118-147142510 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0029322
 protein coding gene Chr5:140155020-140170404 (-)
CBA/J MGP_CBAJ_G0029882
 protein coding gene Chr5:152908217-152922592 (-)
DBA/2J MGP_DBA2J_G0030033
 protein coding gene Chr5:135609537-135625508 (-)
FVB/NJ MGP_FVBNJ_G0029988
 protein coding gene Chr5:134794797-134809482 (-)
LP/J MGP_LPJ_G0030122
 protein coding gene Chr5:142302789-142317374 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030020
 protein coding gene Chr5:155782349-155796752 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030689
 protein coding gene Chr5:139941081-139955306 (-)
PWK/PhJ MGP_PWKPhJ_G0029035
 protein coding gene Chr5:134696998-134712386 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028871
 protein coding gene Chr5:137531399-137546064 (-)
WSB/EiJ MGP_WSBEiJ_G0029395
 protein coding gene Chr5:140683472-140697827 (-)



Homology
more
  • Human Ortholog
    MUC17, mucin 17, cell surface associated
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MUC17, mucin 17, cell surface associated
  • Synonyms
    MUC-17, MUC-3, MUC3
  • Links
    NCBI Gene ID: 140453
    neXtProt AC: NX_Q685J3
    UniProt: Q685J3

  • Chr Location
    7q22.1; chr7:101020072-101058859 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    746
  • Tissues
    19
  • cDNA Data
    11
  • Literature Summary
    4
Sequences &
Gene Models
less
  • All Sequences
    72
  • RefSeq
    35
  • UniProt
    7
Representative SequencesLengthStrain/SpeciesFlank
genomic 666339 NCBI Gene Model | MGI Sequence Detail 39038 C57BL/6J ±  kb
transcript NM_010843 RefSeq | MGI Sequence Detail 14065 C57BL/6  
polypeptide NP_034973 RefSeq | MGI Sequence Detail 4499 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 11
    Primer pair 1
    Other 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:7469659
References
more
  • Summaries
    All 28
    Developmental Gene Expression 4
    Gene Ontology 3
  • Earliest
    J:46806 Shekels LL, et al., Cloning and characterization of mouse intestinal MUC3 mucin: 3' sequence contains epidermal-growth-factor-like domains. Biochem J. 1998 Mar 15;330(Pt 3):1301-8
  • Latest
    J:263086 Schneider H, et al., Study of mucin turnover in the small intestine by in vivo labeling. Sci Rep. 2018 Apr 10;8(1):5760
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory