About   Help   FAQ
Cyba Gene Detail
Summary
  • Symbol
    Cyba
  • Name
    cytochrome b-245, alpha polypeptide
  • Synonyms
    b558, cytochrome beta-558, p22 phox
  • Feature Type
    protein coding gene
  • IDs
    MGI:1316658
    NCBI Gene: 13057
  • Alliance
    gene page
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:123151515-123159669 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 71.04 cM, cytoband E1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    314 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1316658
 protein coding gene Chr8:123151510-123159679 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034224
 protein coding gene Chr8:125961951-125970122 (-)
A/J MGP_AJ_G0034204
 protein coding gene Chr8:120748421-120756685 (-)
AKR/J MGP_AKRJ_G0034131
 protein coding gene Chr8:124266826-124274991 (-)
BALB/cJ MGP_BALBcJ_G0034198
 protein coding gene Chr8:120950213-120958378 (-)
C3H/HeJ MGP_C3HHeJ_G0033909
 protein coding gene Chr8:124966395-124974561 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034718
 protein coding gene Chr8:130146591-130155179 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031660
 protein coding gene Chr8:113584164-113592403 (-)
CAST/EiJ MGP_CASTEiJ_G0033236
 protein coding gene Chr8:125044983-125053125 (-)
CBA/J MGP_CBAJ_G0033882
 protein coding gene Chr8:134951639-134959808 (-)
DBA/2J MGP_DBA2J_G0034038
 protein coding gene Chr8:119940630-119948799 (-)
FVB/NJ MGP_FVBNJ_G0033981
 protein coding gene Chr8:119077423-119086827 (-)
LP/J MGP_LPJ_G0034127
 protein coding gene Chr8:126089053-126097221 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034028
 protein coding gene Chr8:137129298-137137465 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034736
 protein coding gene Chr8:124451113-124459268 (-)
PWK/PhJ MGP_PWKPhJ_G0032938
 protein coding gene Chr8:119759772-119768381 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032778
 protein coding gene Chr8:123175558-123183725 (-)
WSB/EiJ MGP_WSBEiJ_G0033352
 protein coding gene Chr8:125206129-125214294 (-)



Homology
more
  • Human Ortholog
    CYBA, cytochrome b-245 alpha chain
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CYBA, cytochrome b-245 alpha chain
  • Synonyms
    CGD4, p22-PHOX
  • Links
    NCBI Gene ID: 1535
    neXtProt AC: NX_P13498
    UniProt: P13498

  • Chr Location
    16q24.2; chr16:88643275-88651083 (-)  GRCh38
Human Diseases
more
  • Diseases
    7 with human CYBA associations

Human Disease Mouse Models
      
IDs
IDs
IDs
IDs
IDs
IDs
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    34 phenotypes from 3 alleles in 4 genetic backgrounds
    31 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for an ENU-induced mutation exhibit defects in balance, absence of otoconia, and an inability of phagocytes to produce bacteria-destroying reactive oxygen species.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    67
  • GO References
    13
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    762
  • Tissues
    38
  • cDNA Data
    82
  • Literature Summary
    7
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000006519 Ensembl Gene Model | MGI Sequence Detail 8155 C57BL/6J ±  kb
    transcript ENSMUST00000017604 Ensembl | MGI Sequence Detail 744 Not Applicable  
    polypeptide ENSMUSP00000017604 Ensembl | MGI Sequence Detail 192 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 84
      cDNA 82
      Primer pair 2

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:3526724
    References
    more
    • Summaries
      All 87
      Developmental Gene Expression 7
      Gene Ontology 13
      Phenotypes 31
    • Earliest
      J:51302 Sumimoto H, et al., Complementary DNA for the mouse homolog of the small subunit of human cytochrome b558. Biochem Biophys Res Commun. 1989 Dec 15;165(2):902-6
    • Latest
      J:351022 Saldova R, et al., Characterization of intestinal O-glycome in reactive oxygen species deficiency. PLoS One. 2024;19(3):e0297292
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
    Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory