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Klf4 Gene Detail
Summary
  • Symbol
    Klf4
  • Name
    Kruppel-like transcription factor 4 (gut)
  • Synonyms
    EZF, Gklf, Zie
  • Feature Type
    protein coding gene
  • IDs
    MGI:1342287
    NCBI Gene: 16600
  • Alliance
    gene page
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:55527143-55532466 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 29.76 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    134 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1342287
 protein coding gene Chr4:55527137-55536984 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028306
 protein coding gene Chr4:54241406-54248871 (-)
A/J MGP_AJ_G0028267
 protein coding gene Chr4:52156425-52161421 (-)
AKR/J MGP_AKRJ_G0028216
 protein coding gene Chr4:53569668-53574494 (-)
BALB/cJ MGP_BALBcJ_G0028286
 protein coding gene Chr4:52319280-52324641 (-)
C3H/HeJ MGP_C3HHeJ_G0028007
 protein coding gene Chr4:54099566-54105373 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028727
 protein coding gene Chr4:56199518-56205320 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026035
 protein coding gene Chr4:49024556-49029575 (-)
CAST/EiJ MGP_CASTEiJ_G0027445
 protein coding gene Chr4:53797957-53803723 (-)
CBA/J MGP_CBAJ_G0027972
 protein coding gene Chr4:58122495-58138096 (-)
DBA/2J MGP_DBA2J_G0028122
 protein coding gene Chr4:52081499-52086387 (-)
FVB/NJ MGP_FVBNJ_G0028089
 protein coding gene Chr4:51311180-51316498 (-)
LP/J MGP_LPJ_G0028221
 protein coding gene Chr4:54322566-54327479 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028113
 protein coding gene Chr4:61304249-61312164 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028763
 protein coding gene Chr4:53806005-53812886 (-)
PWK/PhJ MGP_PWKPhJ_G0027170
 protein coding gene Chr4:52059139-52065901 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026998
 protein coding gene Chr4:53064961-53070557 (-)
WSB/EiJ MGP_WSBEiJ_G0027523
 protein coding gene Chr4:53709108-53715434 (-)



Homology
more
  • Human Ortholog
    KLF4, KLF transcription factor 4
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KLF4, KLF transcription factor 4
  • Synonyms
    EZF, GKLF
  • Links
    NCBI Gene ID: 9314
    neXtProt AC: NX_O43474
    UniProt: O43474

  • Chr Location
    9q31.2; chr9:107484852-107490482 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human KLF4 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    64 phenotypes from 4 alleles in 8 genetic backgrounds
    9 phenotypes from multigenic genotypes
    187 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygotes for targeted null mutations die shortly after birth due to a skin defect that results in loss of fluids. Mutants also show a dramatic decrease in the number of goblet cells of the colon.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    149
  • GO References
    37
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    1221
  • Tissues
    226
  • cDNA Data
    103
  • Literature Summary
    81
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000003032 Ensembl Gene Model | MGI Sequence Detail 5324 C57BL/6J ±  kb
    transcript ENSMUST00000107619 Ensembl | MGI Sequence Detail 3029 Not Applicable  
    polypeptide ENSMUSP00000103245 Ensembl | MGI Sequence Detail 483 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 118
      cDNA 104
      Primer pair 13
      Other 1

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGD-MRK-36140, MGD-MRK-37337, MGI:107568
    References
    more
    • Summaries
      All 372
      Developmental Gene Expression 81
      Gene Ontology 37
      Phenotypes 187
    • Earliest
      J:34906 Shields JM, et al., Identification and characterization of a gene encoding a gut-enriched Kruppel-like factor expressed during growth arrest. J Biol Chem. 1996 Aug 16;271(33):20009-17
    • Latest
      J:358123 Shen YR, et al., Expansion of the neocortex and protection from neurodegeneration by in vivo transient reprogramming. Cell Stem Cell. 2024 Oct 17;
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory