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Hs6st2 Gene Detail
Summary
  • Symbol
    Hs6st2
  • Name
    heparan sulfate 6-O-sulfotransferase 2
  • Synonyms
    6OST2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1354959
    NCBI Gene: 50786
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:50476084-50770643 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 28.04 cM, cytoband A3.3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    4561 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1354959
 protein coding gene ChrX:50476084-50770733 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035712
 protein coding gene ChrX:46564576-46867564 (-)
A/J MGP_AJ_G0035695
 protein coding gene ChrX:46421612-46719363 (-)
AKR/J MGP_AKRJ_G0035615
 protein coding gene ChrX:47712408-48024689 (-)
BALB/cJ MGP_BALBcJ_G0035681
 protein coding gene ChrX:46011204-46299514 (-)
C3H/HeJ MGP_C3HHeJ_G0035385
 protein coding gene ChrX:46824632-47130621 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036211
 protein coding gene ChrX:47670342-47971468 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033062
 protein coding gene ChrX:43964589-44244564 (-)
CAST/EiJ MGP_CASTEiJ_G0034676
 protein coding gene ChrX:34277265-34572980 (-)
CBA/J MGP_CBAJ_G0035359
 protein coding gene ChrX:49007150-49323812 (-)
DBA/2J MGP_DBA2J_G0035514
 protein coding gene ChrX:46261329-46553721 (-)
FVB/NJ MGP_FVBNJ_G0035462
 protein coding gene ChrX:45954423-46246833 (-)
LP/J MGP_LPJ_G0035601
 protein coding gene ChrX:46893372-47178401 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035501
 protein coding gene ChrX:50548638-50868738 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036228
 protein coding gene ChrX:46470322-46766066 (-)
PWK/PhJ MGP_PWKPhJ_G0034375
 protein coding gene ChrX:33784579-34079401 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034220
 protein coding gene ChrX:35053364-35354940 (-)
WSB/EiJ MGP_WSBEiJ_G0034820
 protein coding gene ChrX:46005687-46301814 (-)



Homology
more
  • Human Ortholog
    HS6ST2, heparan sulfate 6-O-sulfotransferase 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    HS6ST2, heparan sulfate 6-O-sulfotransferase 2
  • Synonyms
    MRXSPM
  • Links
    NCBI Gene ID: 90161
    neXtProt AC: NX_Q96MM7
    UniProt: Q96MM7

  • Chr Location
    Xq26.2; chrX:132626015-132961395 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human HS6ST2 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    2 phenotypes from multigenic genotypes
    14 phenotype references
Female homozygous or male hemizygous mice for a disruption in this gene display a normal phenotype.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    8
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    1054
  • Tissues
    219
  • cDNA Data
    17
  • Literature Summary
    24
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 50786 NCBI Gene Model | MGI Sequence Detail 294560 C57BL/6J ±  kb
transcript NM_001077202 RefSeq | MGI Sequence Detail 4381 C57BL/6  
polypeptide Q80UW0 UniProt | EBI | MGI Sequence Detail 612 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000008766 heparan-sulfate 6-O-sulfotransferase 2
    (term hierarchy)
  • EC
    2.8.2.-
  • InterPro Domains
    IPR010635 Heparan sulphate 6-sulfotransferase/Protein-tyrosine sulfotransferase
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
    IPR005331 Sulfotransferase
  • GlyGen
    Q80UW0 8 sites, 3 N-linked glycans (3 sites)
Molecular
Reagents
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  • All nucleic 25
    cDNA 18
    Primer pair 7

    Microarray probesets 4
References
more
  • Summaries
    All 57
    Developmental Gene Expression 24
    Gene Ontology 6
    Phenotypes 14
  • Earliest
    J:60682 Habuchi H, et al., The occurrence of three isoforms of heparan sulfate 6-O-sulfotransferase having different specificities for hexuronic acid adjacent to the targeted N-sulfoglucosamine. J Biol Chem. 2000 Jan 28;275(4):2859-68
  • Latest
    J:357397 Moon S, et al., Knockout of the intellectual disability-linked gene Hs6st2 in mice decreases heparan sulfate 6-O-sulfation, impairs dendritic spines of hippocampal neurons, and affects memory. Glycobiology. 2024 Mar 26;34(2)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory