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Atp5mk Gene Detail
Summary
  • Symbol
    Atp5mk
  • Name
    ATP synthase membrane subunit k
  • Synonyms
    2010301L15Rik, Atp5md, Usmg5
  • Feature Type
    protein coding gene
  • IDs
    MGI:1891435
    NCBI Gene: 66477
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:47071910-47079086 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 39.23 cM, cytoband D2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    345 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1891435
 protein coding gene Chr19:47071903-47079086 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025222
 protein coding gene Chr19:46858860-46867561 (-)
A/J MGP_AJ_G0025198
 protein coding gene Chr19:44518239-44525935 (-)
AKR/J MGP_AKRJ_G0025167
 protein coding gene Chr19:45978080-45985435 (-)
BALB/cJ MGP_BALBcJ_G0025193
 protein coding gene Chr19:44568468-44575538 (-)
C3H/HeJ MGP_C3HHeJ_G0024953
 protein coding gene Chr19:46155058-46162128 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025636
 protein coding gene Chr19:47981748-47988902 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0024418
 protein coding gene Chr19:45966943-45973911 (-)
CBA/J MGP_CBAJ_G0024933
 protein coding gene Chr19:50417003-50424073 (-)
DBA/2J MGP_DBA2J_G0025065
 protein coding gene Chr19:44334498-44341568 (-)
FVB/NJ MGP_FVBNJ_G0025026
 protein coding gene Chr19:44124393-44131750 (-)
LP/J MGP_LPJ_G0025151
 protein coding gene Chr19:46754475-46763560 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025057
 protein coding gene Chr19:49706299-49713369 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025694
 protein coding gene Chr19:46093892-46102071 (-)
PWK/PhJ MGP_PWKPhJ_G0024167
 protein coding gene Chr19:44296232-44303615 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0024488
 protein coding gene Chr19:46239525-46246597 (-)



Homology
more
  • Human Ortholog
    ATP5MK, ATP synthase membrane subunit k
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ATP5MK, ATP synthase membrane subunit k
  • Synonyms
    AGP, ATP5MD, bA792D24.4, DAPIT, HCVFTP2, MC5DN6, USMG5
  • Links
    NCBI Gene ID: 84833
    neXtProt AC: NX_Q96IX5
    UniProt: Q96IX5

  • Chr Location
    10q24.33; chr10:103389041-103396492 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human ATP5MK associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotypes from 1 allele in 1 genetic background
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    7
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    767
  • Tissues
    45
  • cDNA Data
    13
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 66477 NCBI Gene Model | MGI Sequence Detail 7177 C57BL/6J ±  kb
    transcript NM_023211 RefSeq | MGI Sequence Detail 363 C57BL/6  
    polypeptide Q78IK2 UniProt | EBI | MGI Sequence Detail 58 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    • Protein Ontology
      PR:000017143 ATP synthase membrane subunit K, mitochondrial
      (term hierarchy)
    • InterPro Domains
      IPR009125 ATP synthase membrane subunit K
    • GlyGen
      Q78IK2 1 site, 1 O-linked glycan (1 site)
    Molecular
    Reagents
    less
    • All nucleic 14
      cDNA 14

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:1913727, MGI:6277083, MGI:7469651
    References
    more
    • Summaries
      All 40
      Developmental Gene Expression 1
      Gene Ontology 7
      Phenotypes 12
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory