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Prr13 Gene Detail
Summary
  • Symbol
    Prr13
  • Name
    proline rich 13
  • Synonyms
    1110020C13Rik, 2010324E22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913401
    NCBI Gene: 66151
  • Alliance
  • Transcription Start Sites
    21 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:102367605-102371241 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 15, 57.60 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    150 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913401
protein coding gene Chr15:102367463-102371241 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022414
protein coding gene Chr15:104644885-104648663 (+)
A/J MGP_AJ_G0022376
protein coding gene Chr15:100521548-100525321 (+)
AKR/J MGP_AKRJ_G0022351
protein coding gene Chr15:103568600-103572378 (+)
BALB/cJ MGP_BALBcJ_G0022380
protein coding gene Chr15:100578769-100582588 (+)
C3H/HeJ MGP_C3HHeJ_G0022147
protein coding gene Chr15:103645496-103649339 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022829
protein coding gene Chr15:108537475-108541286 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020352
protein coding gene Chr15:96300189-96303080 (+)
CAST/EiJ MGP_CASTEiJ_G0021673
protein coding gene Chr15:104521918-104525681 (+)
CBA/J MGP_CBAJ_G0022116
protein coding gene Chr15:112348525-112352301 (+)
DBA/2J MGP_DBA2J_G0022247
protein coding gene Chr15:99807491-99811324 (+)
FVB/NJ MGP_FVBNJ_G0022223
protein coding gene Chr15:98869289-98873094 (+)
LP/J MGP_LPJ_G0022316
protein coding gene Chr15:104793202-104796980 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022245
protein coding gene Chr15:115901375-115905142 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022841
protein coding gene Chr15:103602982-103608303 (+)
PWK/PhJ MGP_PWKPhJ_G0021413
protein coding gene Chr15:99967086-99970912 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021245
protein coding gene Chr15:103447300-103451196 (+)
WSB/EiJ MGP_WSBEiJ_G0021723
protein coding gene Chr15:104233938-104237725 (+)



Homology
more
  • Human Ortholog
    PRR13, proline rich 13
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRR13, proline rich 13
  • Synonyms
    TXR1
  • Links
    NCBI Gene ID: 54458
    neXtProt AC: NX_Q9NZ81
    UniProt: Q9NZ81

  • Chr Location
    12q13.13; chr12:53441678-53446645 (+)  GRCh38

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    27 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66151 NCBI Gene Model | MGI Sequence Detail 3637 C57BL/6J ±  kb
transcript NM_025385 RefSeq | MGI Sequence Detail 1229 C57BL/6  
polypeptide Q9CQJ5 UniProt | EBI | MGI Sequence Detail 137 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 113
    cDNA 113

    Microarray probesets 4
Other
Accession IDs
less
MGI:1919350
References
more
  • Summaries
    All 51
    Diseases 1
    Gene Ontology 3
    Phenotypes 27
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
11/19/2024
MGI 6.24
The Jackson Laboratory