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Bsdc1 Gene Detail
Summary
  • Symbol
    Bsdc1
  • Name
    BSD domain containing 1
  • Synonyms
    1110063F24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913466
    NCBI Gene: 100383
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:129355472-129382291 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 63.26 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    260 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913466
 protein coding gene Chr4:129355374-129382291 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028823
 protein coding gene Chr4:131385325-131411847 (+)
A/J MGP_AJ_G0028782
 protein coding gene Chr4:126139663-126167112 (+)
AKR/J MGP_AKRJ_G0028735
 protein coding gene Chr4:129645863-129673165 (+)
BALB/cJ MGP_BALBcJ_G0028805
 protein coding gene Chr4:126731886-126762308 (+)
C3H/HeJ MGP_C3HHeJ_G0028519
 protein coding gene Chr4:129706926-129737663 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029247
 protein coding gene Chr4:136326459-136355126 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026520
 protein coding gene Chr4:119272816-119297990 (+)
CAST/EiJ MGP_CASTEiJ_G0027952
 protein coding gene Chr4:127884596-127911687 (+)
CBA/J MGP_CBAJ_G0028485
 protein coding gene Chr4:139700978-139727733 (+)
DBA/2J MGP_DBA2J_G0028634
 protein coding gene Chr4:126572368-126599196 (+)
FVB/NJ MGP_FVBNJ_G0028601
 protein coding gene Chr4:125332003-125360075 (+)
LP/J MGP_LPJ_G0028735
 protein coding gene Chr4:131662566-131689068 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028627
 protein coding gene Chr4:144541750-144569563 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029285
 protein coding gene Chr4:130023132-130051229 (+)
PWK/PhJ MGP_PWKPhJ_G0027673
 protein coding gene Chr4:123166024-123194240 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027500
 protein coding gene Chr4:125887945-125917091 (+)
WSB/EiJ MGP_WSBEiJ_G0028032
 protein coding gene Chr4:130143794-130170214 (+)



Homology
more
  • Human Ortholog
    BSDC1, BSD domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    BSDC1, BSD domain containing 1
  • Links
    NCBI Gene ID: 55108
    neXtProt AC: NX_Q9NW68
    UniProt: Q9NW68

  • Chr Location
    1p35.1; chr1:32364633-32394731 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    17 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    90
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100383 NCBI Gene Model | MGI Sequence Detail 26820 C57BL/6J ±  kb
transcript NM_133889 RefSeq | MGI Sequence Detail 2684 C57BL/6  
polypeptide Q80Y55 UniProt | EBI | MGI Sequence Detail 427 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 90
    cDNA 90

    Microarray probesets 4
Other
Accession IDs
less
MGI:2140541
References
more
  • Summaries
    All 39
    Gene Ontology 1
    Phenotypes 17
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory