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Llph Gene Detail
Summary
  • Symbol
    Llph
  • Name
    LLP homolog, long-term synaptic facilitation (Aplysia)
  • Synonyms
    1190005P17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913475
    NCBI Gene: 66225
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:120062967-120067976 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 67.94 cM, cytoband D2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    301 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913475
 protein coding gene Chr10:120062967-120068487 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017774
 protein coding gene Chr10:123378571-123382795 (+)
A/J MGP_AJ_G0017749
 protein coding gene Chr10:118492109-118498271 (+)
AKR/J MGP_AKRJ_G0017712
 protein coding gene Chr10:122026815-122031677 (+)
BALB/cJ MGP_BALBcJ_G0017713
 protein coding gene Chr10:118880130-118885159 (+)
C3H/HeJ MGP_C3HHeJ_G0017537
 protein coding gene Chr10:122231545-122236501 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018168
 protein coding gene Chr10:127554819-127562444 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015849
 protein coding gene Chr10:112852114-112857138 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0017506
 protein coding gene Chr10:132753295-132758628 (+)
DBA/2J MGP_DBA2J_G0017612
 protein coding gene Chr10:117629335-117633591 (+)
FVB/NJ MGP_FVBNJ_G0017607
 protein coding gene Chr10:116620313-116624933 (+)
LP/J MGP_LPJ_G0017686
 protein coding gene Chr10:123926834-123931698 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017636
 protein coding gene Chr10:135369023-135373263 (+)
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0016882
 protein coding gene Chr10:117726148-117731798 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016673
 protein coding gene Chr10:120925205-120930211 (+)
WSB/EiJ MGP_WSBEiJ_G0017158
 protein coding gene Chr10:122276553-122282345 (+)



Homology
more
  • Human Ortholog
    LLPH, LLP homolog, long-term synaptic facilitation factor
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LLPH, LLP homolog, long-term synaptic facilitation factor
  • Synonyms
    C12orf31, hLLP
  • Links
    NCBI Gene ID: 84298
    neXtProt AC: NX_Q9BRT6
    UniProt: Q9BRT6

  • Chr Location
    12q14.3; chr12:66116555-66130750 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    33
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66225 NCBI Gene Model | MGI Sequence Detail 5010 C57BL/6J ±  kb
transcript NM_001417829 RefSeq | MGI Sequence Detail 1587 C57BL/6  
polypeptide Q9D945 UniProt | EBI | MGI Sequence Detail 130 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 33
    cDNA 33

    Microarray probesets 4
References
more
  • Summaries
    All 33
    Gene Ontology 4
    Phenotypes 11
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:235308 Yu NK, et al., A transducible nuclear/nucleolar protein, mLLP, regulates neuronal morphogenesis and synaptic transmission. Sci Rep. 2016;6:22892
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory