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Atp6v1g1 Gene Detail
Summary
  • Symbol
    Atp6v1g1
  • Name
    ATPase, H+ transporting, lysosomal V1 subunit G1
  • Synonyms
    1810024D14Rik, Atp6g1, ATP6J, lysosomal 13kDa, VAG1, Vma10
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913540
    NCBI Gene: 66290
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:63463002-63468938 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 34.01 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    203 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913540
 protein coding gene Chr4:63463002-63468987 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028369
 protein coding gene Chr4:62560824-62568231 (+)
A/J MGP_AJ_G0028330
 protein coding gene Chr4:60313097-60319171 (+)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0028350
 protein coding gene Chr4:60499631-60505618 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0028790
 protein coding gene Chr4:64708661-64714709 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026093
 protein coding gene Chr4:57666455-57672578 (+)
CAST/EiJ MGP_CASTEiJ_G0027504
 protein coding gene Chr4:60472139-60489418 (+)
CBA/J MGP_CBAJ_G0025425
 protein coding gene Chr2:41550875-41557250 (-)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0028149
 protein coding gene Chr4:59447320-59453919 (+)
LP/J MGP_LPJ_G0028282
 protein coding gene Chr4:62849840-62863109 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028178
 protein coding gene Chr4:70073261-70085030 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028826
 protein coding gene Chr4:62068221-62074188 (+)
PWK/PhJ MGP_PWKPhJ_G0027233
 protein coding gene Chr4:58706453-58715431 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027059
 protein coding gene Chr4:59552663-59558764 (+)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    ATP6V1G1, ATPase H+ transporting V1 subunit G1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ATP6V1G1, ATPase H+ transporting V1 subunit G1
  • Synonyms
    ATP6G, ATP6G1, ATP6GL, ATP6J, Vma10
  • Links
    NCBI Gene ID: 9550
    neXtProt AC: NX_O75348
    UniProt: O75348

  • Chr Location
    9q32; chr9:114587706-114598915 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    30
  • GO References
    10
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    941
  • Tissues
    142
  • cDNA Data
    81
  • Literature Summary
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66290 NCBI Gene Model | MGI Sequence Detail 5937 C57BL/6J ±  kb
transcript NM_024173 RefSeq | MGI Sequence Detail 1109 C57BL/6  
polypeptide Q9CR51 UniProt | EBI | MGI Sequence Detail 118 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 85
    cDNA 81
    Primer pair 2
    Other 2

    Microarray probesets 6
Other
Accession IDs
less
MGI:2138817
References
more
  • Summaries
    All 45
    Developmental Gene Expression 6
    Gene Ontology 10
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:294726 Wu JJ, et al., ALS/FTD mutations in UBQLN2 impede autophagy by reducing autophagosome acidification through loss of function. Proc Natl Acad Sci U S A. 2020 Jun 30;117(26):15230-15241
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory