About   Help   FAQ
Smim10l1 Gene Detail
Summary
  • Symbol
    Smim10l1
  • Name
    small integral membrane protein 10 like 1
  • Synonyms
    2700089E24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914379
    NCBI Gene: 381820
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:133082202-133087862 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 64.03 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    304 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914379
 protein coding gene Chr6:133081872-133087862 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031399
 protein coding gene Chr6:137272908-137279670 (+)
A/J MGP_AJ_G0031375
 protein coding gene Chr6:131824049-131832326 (+)
AKR/J MGP_AKRJ_G0031302
 protein coding gene Chr6:135723183-135729827 (+)
BALB/cJ MGP_BALBcJ_G0031381
 protein coding gene Chr6:131442124-131448482 (+)
C3H/HeJ MGP_C3HHeJ_G0031103
 protein coding gene Chr6:135889583-135897407 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031841
 protein coding gene Chr6:140956704-140962776 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028973
 protein coding gene Chr6:130103612-130109658 (+)
CAST/EiJ MGP_CASTEiJ_G0030473
 protein coding gene Chr6:135541481-135551905 (+)
CBA/J MGP_CBAJ_G0031062
 protein coding gene Chr6:146216320-146225454 (+)
DBA/2J MGP_DBA2J_G0031220
 protein coding gene Chr6:130671290-130676830 (+)
FVB/NJ MGP_FVBNJ_G0031170
 protein coding gene Chr6:129673649-129679009 (+)
LP/J MGP_LPJ_G0031304
 protein coding gene Chr6:137366539-137373176 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031210
 protein coding gene Chr6:150327191-150335369 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031875
 protein coding gene Chr6:135679251-135684726 (+)
PWK/PhJ MGP_PWKPhJ_G0030197
 protein coding gene Chr6:129096463-129102583 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030021
 protein coding gene Chr6:134069774-134075947 (+)
WSB/EiJ MGP_WSBEiJ_G0030563
 protein coding gene Chr6:136272418-136279423 (+)



Homology
more
  • Human Ortholog
    SMIM10, small integral membrane protein 10
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SMIM10, small integral membrane protein 10
  • Synonyms
    CXorf69
  • Links
    NCBI Gene ID: 644538
    neXtProt AC: NX_Q96HG1
    UniProt: Q96HG1

  • Chr Location
    Xq26.3; chrX:134990991-134992473 (+)  GRCh38
  • Human Ortholog
    SMIM10L1, small integral membrane protein 10 like 1
  • Links
    NCBI Gene ID: 100129361
    neXtProt AC: NX_P0DMW3
    UniProt: P0DMW3

  • Chr Location
    12p13.2; chr12:11171194-11176016 (+)  GRCh38
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    59
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 381820 NCBI Gene Model | MGI Sequence Detail 5661 C57BL/6J ±  kb
transcript NM_001163445 RefSeq | MGI Sequence Detail 2512 C57BL/6  
polypeptide NP_001258512 RefSeq | MGI Sequence Detail 89 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR029367 Small integral membrane protein 10
Molecular
Reagents
less
  • All nucleic 59
    cDNA 59

    Microarray probesets 6
Other
Accession IDs
less
MGI:2141464
References
more
  • Summaries
    All 21
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory