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Zswim3 Gene Detail
Summary
  • Symbol
    Zswim3
  • Name
    zinc finger SWIM-type containing 3
  • Synonyms
    4921517A06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914788
    NCBI Gene: 67538
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:164647034-164664047 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 85.27 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    432 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914788
 protein coding gene Chr2:164647018-164664050 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026875
 protein coding gene Chr2:170307589-170324775 (+)
A/J MGP_AJ_G0026842
 protein coding gene Chr2:163344113-163361084 (+)
AKR/J MGP_AKRJ_G0026813
 protein coding gene Chr2:168219154-168236164 (+)
BALB/cJ MGP_BALBcJ_G0026851
 protein coding gene Chr2:163703371-163722412 (+)
C3H/HeJ MGP_C3HHeJ_G0026593
 protein coding gene Chr2:168564604-168582036 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027298
 protein coding gene Chr2:175238513-175257513 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024669
 protein coding gene Chr2:156749392-156768036 (+)
CAST/EiJ MGP_CASTEiJ_G0026051
 protein coding gene Chr2:168978311-168997007 (+)
CBA/J MGP_CBAJ_G0026570
 protein coding gene Chr2:181598156-181620514 (+)
DBA/2J MGP_DBA2J_G0026708
 protein coding gene Chr2:162509435-162528096 (+)
FVB/NJ MGP_FVBNJ_G0026674
 protein coding gene Chr2:160930389-160947616 (+)
LP/J MGP_LPJ_G0026810
 protein coding gene Chr2:170365467-170384800 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026693
 protein coding gene Chr2:185162382-185180940 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027355
 protein coding gene Chr2:168106095-168123447 (+)
PWK/PhJ MGP_PWKPhJ_G0025788
 protein coding gene Chr2:162110495-162129036 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025589
 protein coding gene Chr2:167002638-167022265 (+)
WSB/EiJ MGP_WSBEiJ_G0026124
 protein coding gene Chr2:168985955-169002933 (+)



Homology
more
  • Human Ortholog
    ZSWIM3, zinc finger SWIM-type containing 3
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZSWIM3, zinc finger SWIM-type containing 3
  • Synonyms
    C20orf164, PPP1R174
  • Links
    NCBI Gene ID: 140831
    neXtProt AC: NX_Q96MP5
    UniProt: Q96MP5

  • Chr Location
    20q13.12; chr20:45857614-45879122 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    48
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67538 NCBI Gene Model | MGI Sequence Detail 17014 C57BL/6J ±  kb
transcript NM_178375 RefSeq | MGI Sequence Detail 2711 Not Specified  
polypeptide Q8CFL8 UniProt | EBI | MGI Sequence Detail 695 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 48
    cDNA 48

    Microarray probesets 3
Other
Accession IDs
less
MGI:2139527
References
more
  • Summaries
    All 26
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory