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Rnf41 Gene Detail
Summary
  • Symbol
    Rnf41
  • Name
    ring finger protein 41
  • Synonyms
    2210404G21Rik, 4930511A05Rik, 4933415P08Rik, D10Ertd722e, FLRF, Nrdp1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914838
    NCBI Gene: 67588
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:128247526-128277310 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 76.55 cM, cytoband D3
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    812 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914838
 protein coding gene Chr10:128247485-128277310 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017865
 protein coding gene Chr10:132145293-132178326 (+)
A/J MGP_AJ_G0017840
 protein coding gene Chr10:126838706-126867732 (+)
AKR/J MGP_AKRJ_G0017803
 protein coding gene Chr10:130561420-130590691 (+)
BALB/cJ MGP_BALBcJ_G0017804
 protein coding gene Chr10:127220961-127251901 (+)
C3H/HeJ MGP_C3HHeJ_G0017627
 protein coding gene Chr10:130724891-130753942 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018259
 protein coding gene Chr10:136622728-136656080 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015937
 protein coding gene Chr10:120771798-120801123 (+)
CAST/EiJ MGP_CASTEiJ_G0017188
 protein coding gene Chr10:131437337-131466367 (+)
CBA/J MGP_CBAJ_G0017597
 protein coding gene Chr10:142169410-142204225 (+)
DBA/2J MGP_DBA2J_G0017703
 protein coding gene Chr10:125902554-125932773 (+)
FVB/NJ MGP_FVBNJ_G0017698
 protein coding gene Chr10:124829475-124858795 (+)
LP/J MGP_LPJ_G0017777
 protein coding gene Chr10:132738668-132769385 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017726
 protein coding gene Chr10:144775000-144805175 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018299
 protein coding gene Chr10:130661784-130695016 (+)
PWK/PhJ MGP_PWKPhJ_G0016973
 protein coding gene Chr10:126159757-126190223 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016762
 protein coding gene Chr10:129755868-129790614 (+)
WSB/EiJ MGP_WSBEiJ_G0017247
 protein coding gene Chr10:130877271-130908754 (+)



Homology
more
  • Human Ortholog
    RNF41, ring finger protein 41
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RNF41, ring finger protein 41
  • Synonyms
    FLRF, NRDP1, SBBI03
  • Links
    NCBI Gene ID: 10193
    neXtProt AC: NX_Q9H4P4
    UniProt: Q9H4P4

  • Chr Location
    12q13.3; chr12:56202179-56221969 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human RNF41 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 2 alleles in 2 genetic backgrounds
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a transgenic gene disruption exhibit male infertility. In contrast, mice homozygous for a gene trapped allele showed no overt phenotypes but show an increase in activation of naive CD8+ T cells before TCR engagement.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    45
  • GO References
    11
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    749
  • Tissues
    39
  • cDNA Data
    22
  • Literature Summary
    4
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000025373 Ensembl Gene Model | MGI Sequence Detail 29785 C57BL/6J ±  kb
    transcript ENSMUST00000171342 Ensembl | MGI Sequence Detail 3283 Not Applicable  
    polypeptide ENSMUSP00000132751 Ensembl | MGI Sequence Detail 317 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 23
      cDNA 22
      Primer pair 1

      Microarray probesets 9
    Other
    Accession IDs
    less
    MGI:1289336, MGI:1918379, MGI:1922926
    References
    more
    • Summaries
      All 58
      Developmental Gene Expression 4
      Gene Ontology 11
      Phenotypes 12
    • Earliest
      J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory