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Trmt112 Gene Detail
Summary
  • Symbol
    Trmt112
  • Name
    tRNA methyltransferase 11-2
  • Synonyms
    0610038D11Rik, Trm112p
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914924
    NCBI Gene: 67674
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:6887066-6888396 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 5.08 cM, cytoband E1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    85 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914924
 protein coding gene Chr19:6887066-6888417 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024769
 protein coding gene Chr19:3999445-4000795 (+)
A/J MGP_AJ_G0024735
 protein coding gene Chr19:3670373-3671624 (+)
AKR/J MGP_AKRJ_G0024708
 protein coding gene Chr19:3786634-3787988 (+)
BALB/cJ MGP_BALBcJ_G0024735
 protein coding gene Chr19:3780125-3781850 (+)
C3H/HeJ MGP_C3HHeJ_G0024503
 protein coding gene Chr19:3913506-3914860 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025181
 protein coding gene Chr19:4086505-4088051 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022615
 protein coding gene Chr19:3580029-3581261 (+)
CAST/EiJ MGP_CASTEiJ_G0023975
 protein coding gene Chr19:3821933-3823283 (+)
CBA/J MGP_CBAJ_G0024475
 protein coding gene Chr19:4133982-4137729 (+)
DBA/2J MGP_DBA2J_G0024602
 protein coding gene Chr19:3644581-3645930 (+)
FVB/NJ MGP_FVBNJ_G0024568
 protein coding gene Chr19:3672710-3674442 (+)
LP/J MGP_LPJ_G0024688
 protein coding gene Chr19:3858900-3863538 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024597
 protein coding gene Chr19:4044216-4045567 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025229
 protein coding gene Chr19:3921085-3922433 (+)
PWK/PhJ MGP_PWKPhJ_G0023721
 protein coding gene Chr19:3686588-3687936 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023526
 protein coding gene Chr19:3740650-3741527 (+)
WSB/EiJ MGP_WSBEiJ_G0024037
 protein coding gene Chr19:3817691-3823095 (+)



Homology
more
  • Human Ortholog
    TRMT112, tRNA methyltransferase activator subunit 11-2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRMT112, tRNA methyltransferase activator subunit 11-2
  • Synonyms
    HSPC152, HSPC170, hTrm112, TRM112, TRMT11-2
  • Links
    NCBI Gene ID: 51504
    neXtProt AC: NX_Q9UI30
    UniProt: Q9UI30

  • Chr Location
    11q13.1; chr11:64316460-64318596 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    30
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    802
  • Tissues
    83
  • cDNA Data
    8
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67674 NCBI Gene Model | MGI Sequence Detail 1331 C57BL/6J ±  kb
transcript NM_001166370 RefSeq | MGI Sequence Detail 1047 C57BL/6  
polypeptide Q9DCG9 UniProt | EBI | MGI Sequence Detail 125 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 8
    Primer pair 2
    Other 1

    Microarray probesets 7
References
more
  • Summaries
    All 28
    Developmental Gene Expression 3
    Gene Ontology 6
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:231223 Kusevic D, et al., Substrate Specificity of the HEMK2 Protein Glutamine Methyltransferase and Identification of Novel Substrates. J Biol Chem. 2016 Mar 18;291(12):6124-33
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory