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Yipf4 Gene Detail
Summary
  • Symbol
    Yipf4
  • Name
    Yip1 domain family, member 4
  • Synonyms
    2310034L04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915114
    NCBI Gene: 67864
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:74796488-74807272 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 45.64 cM, cytoband E3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    461 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915114
 protein coding gene Chr17:74796488-74807272 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024030
 protein coding gene Chr17:77138810-77151180 (+)
A/J MGP_AJ_G0023987
 protein coding gene Chr17:74776694-74787468 (+)
AKR/J MGP_AKRJ_G0023956
 protein coding gene Chr17:75847052-75858846 (+)
BALB/cJ MGP_BALBcJ_G0023989
 protein coding gene Chr17:74672334-74683719 (+)
C3H/HeJ MGP_C3HHeJ_G0023753
 protein coding gene Chr17:76769591-76781054 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024434
 protein coding gene Chr17:79896737-79922580 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021878
 protein coding gene Chr17:70400937-70411970 (+)
CAST/EiJ MGP_CASTEiJ_G0023233
 protein coding gene Chr17:77279574-77290307 (+)
CBA/J MGP_CBAJ_G0023727
 protein coding gene Chr17:83259750-83279275 (+)
DBA/2J MGP_DBA2J_G0023856
 protein coding gene Chr17:73355892-73366765 (+)
FVB/NJ MGP_FVBNJ_G0023822
 protein coding gene Chr17:72858957-72870953 (+)
LP/J MGP_LPJ_G0023939
 protein coding gene Chr17:77897362-77910897 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023850
 protein coding gene Chr17:83052287-83063731 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024478
 protein coding gene Chr17:76319319-76330494 (+)
PWK/PhJ MGP_PWKPhJ_G0022979
 protein coding gene Chr17:72734839-72746071 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022790
 protein coding gene Chr17:73024357-73036614 (+)
WSB/EiJ MGP_WSBEiJ_G0023300
 protein coding gene Chr17:77184181-77198709 (+)



Homology
more
  • Human Ortholog
    YIPF4, Yip1 domain family member 4
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    YIPF4, Yip1 domain family member 4
  • Synonyms
    FinGER4, Nbla11189, YIPFalpha2
  • Links
    NCBI Gene ID: 84272
    neXtProt AC: NX_Q9BSR8
    UniProt: Q9BSR8

  • Chr Location
    2p22.3; chr2:32277904-32316594 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    5
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    716
  • Tissues
    5
  • cDNA Data
    69
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67864 NCBI Gene Model | MGI Sequence Detail 10785 C57BL/6J ±  kb
transcript NM_026417 RefSeq | MGI Sequence Detail 2133 C57BL/6  
polypeptide Q8C407 UniProt | EBI | MGI Sequence Detail 246 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 70
    cDNA 70

    Microarray probesets 3
References
more
  • Summaries
    All 32
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory