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Sugt1 Gene Detail
Summary
  • Symbol
    Sugt1
  • Name
    SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
  • Synonyms
    2410174K12Rik, SGT1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915205
    NCBI Gene: 67955
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:79825100-79868237 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 42.72 cM, cytoband D3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1258 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915205
 protein coding gene Chr14:79825100-79872636 (+)
129S1/SvImJ MGP_129S1SvImJ_G0021601
 protein coding gene Chr14:74719993-74774225 (+)
A/J MGP_AJ_G0021559
 protein coding gene Chr14:72866362-72910604 (+)
AKR/J MGP_AKRJ_G0021535
 protein coding gene Chr14:75032147-75078398 (+)
BALB/cJ MGP_BALBcJ_G0021565
 protein coding gene Chr14:72717867-72759912 (+)
C3H/HeJ MGP_C3HHeJ_G0021343
 protein coding gene Chr14:74764451-74809527 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022005
 protein coding gene Chr14:77891169-77936430 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019544
 protein coding gene Chr14:70397476-70436595 (+)
CAST/EiJ MGP_CASTEiJ_G0020858
 protein coding gene Chr14:71548248-71594499 (+)
CBA/J MGP_CBAJ_G0021311
 protein coding gene Chr14:80401502-80446816 (+)
DBA/2J MGP_DBA2J_G0021435
 protein coding gene Chr14:72267240-72309523 (+)
FVB/NJ MGP_FVBNJ_G0021411
 protein coding gene Chr14:71604816-71648016 (+)
LP/J MGP_LPJ_G0021503
 protein coding gene Chr14:75820361-75865296 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021439
 protein coding gene Chr14:79062157-79107969 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022028
 protein coding gene Chr14:74348222-74392932 (+)
PWK/PhJ MGP_PWKPhJ_G0020603
 protein coding gene Chr14:69059383-69103204 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020439
 protein coding gene Chr14:70319408-70362556 (+)
WSB/EiJ MGP_WSBEiJ_G0020913
 protein coding gene Chr14:74706605-74749862 (+)



Homology
more
  • Human Ortholog
    SUGT1, SGT1 homolog, MIS12 kinetochore complex assembly cochaperone
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SUGT1, SGT1 homolog, MIS12 kinetochore complex assembly cochaperone
  • Synonyms
    SGT1
  • Links
    NCBI Gene ID: 10910
    neXtProt AC: NX_Q9Y2Z0
    UniProt: Q9Y2Z0

  • Chr Location
    13q14.3; chr13:52652709-52700909 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 2 alleles in 3 genetic backgrounds
    2 phenotypes from multigenic genotypes
    15 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygous null embryos die prior to E8.5.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    14
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    792
  • Tissues
    41
  • cDNA Data
    197
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 67955 NCBI Gene Model | MGI Sequence Detail 43138 C57BL/6J ±  kb
    transcript NM_026474 RefSeq | MGI Sequence Detail 3024 C57BL/6  
    polypeptide Q9CX34 UniProt | EBI | MGI Sequence Detail 336 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 197
      cDNA 197

      Microarray probesets 3
    References
    more
    • Summaries
      All 44
      Developmental Gene Expression 2
      Gene Ontology 7
      Phenotypes 15
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory