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Arl9 Gene Detail
Summary
  • Symbol
    Arl9
  • Name
    ADP-ribosylation factor-like 9
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915496
    NCBI Gene: 384185
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:77151902-77158453 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 41.45 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    186 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915496
 protein coding gene Chr5:77146054-77158806 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029652
 protein coding gene Chr5:77220822-77227374 (+)
A/J MGP_AJ_G0029620
 protein coding gene Chr5:74267177-74273718 (+)
AKR/J MGP_AKRJ_G0029568
 protein coding gene Chr5:76690496-76697021 (+)
BALB/cJ MGP_BALBcJ_G0029629
 protein coding gene Chr5:75003455-75009998 (+)
C3H/HeJ MGP_C3HHeJ_G0029352
 protein coding gene Chr5:77064126-77070656 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030083
 protein coding gene Chr5:80311746-80318288 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027324
 protein coding gene Chr5:69897804-69903424 (+)
CAST/EiJ MGP_CASTEiJ_G0028760
 protein coding gene Chr5:76272694-76279332 (+)
CBA/J MGP_CBAJ_G0029321
 protein coding gene Chr5:82954548-82961080 (+)
DBA/2J MGP_DBA2J_G0029466
 protein coding gene Chr5:74332001-74338531 (+)
FVB/NJ MGP_FVBNJ_G0029427
 protein coding gene Chr5:73527920-73534386 (+)
LP/J MGP_LPJ_G0029553
 protein coding gene Chr5:77657944-77664487 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029455
 protein coding gene Chr5:86085058-86091681 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030116
 protein coding gene Chr5:76242528-76249076 (+)
PWK/PhJ MGP_PWKPhJ_G0028483
 protein coding gene Chr5:73344762-73351211 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028318
 protein coding gene Chr5:75598674-75605266 (+)
WSB/EiJ MGP_WSBEiJ_G0028840
 protein coding gene Chr5:76573087-76579617 (+)



Homology
more
  • Human Ortholog
    ARL9, ARF like GTPase 9
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    710
  • Tissues
    4
  • cDNA Data
    3
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000063820 Ensembl Gene Model | MGI Sequence Detail 6552 C57BL/6J ±  kb
transcript ENSMUST00000134197 Ensembl | MGI Sequence Detail 534 Not Applicable  
polypeptide ENSMUSP00000122846 Ensembl | MGI Sequence Detail 171 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
    IPR053254 Small GTPase Arf-like protein
    IPR006689 Small GTPase superfamily, ARF/SAR type
    IPR005225 Small GTP-binding protein domain
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Phenotypes 9
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory