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Smim11 Gene Detail
Summary
  • Symbol
    Smim11
  • Name
    small integral membrane protein 11
  • Synonyms
    1190017O12Rik, Fam165b
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916186
    NCBI Gene: 68936
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:92098174-92109929 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 53.55 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    361 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916186
 protein coding gene Chr16:92098131-92109929 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023054
 protein coding gene Chr16:93382617-93395343 (+)
A/J MGP_AJ_G0023022
 protein coding gene Chr16:89004856-89016853 (+)
AKR/J MGP_AKRJ_G0022992
 protein coding gene Chr16:91716734-91728492 (+)
BALB/cJ MGP_BALBcJ_G0023024
 protein coding gene Chr16:89533376-89545852 (+)
C3H/HeJ MGP_C3HHeJ_G0022785
 protein coding gene Chr16:92258179-92269938 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023471
 protein coding gene Chr16:96354711-96366466 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020973
 protein coding gene Chr16:86691448-86703021 (+)
CAST/EiJ MGP_CASTEiJ_G0022304
 protein coding gene Chr16:92853250-92864858 (+)
CBA/J MGP_CBAJ_G0022754
 protein coding gene Chr16:100505170-100516934 (+)
DBA/2J MGP_DBA2J_G0022888
 protein coding gene Chr16:88907222-88921747 (+)
FVB/NJ MGP_FVBNJ_G0022862
 protein coding gene Chr16:88034550-88047368 (+)
LP/J MGP_LPJ_G0022958
 protein coding gene Chr16:93068057-93085269 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022883
 protein coding gene Chr16:105007473-105020702 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023489
 protein coding gene Chr16:92224572-92236358 (+)
PWK/PhJ MGP_PWKPhJ_G0022049
 protein coding gene Chr16:89093977-89105801 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021879
 protein coding gene Chr16:91788091-91799768 (+)
WSB/EiJ MGP_WSBEiJ_G0022356
 protein coding gene Chr16:92461462-92478630 (+)



Homology
more
  • Human Ortholog
    SMIM11, small integral membrane protein 11
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SMIM11, small integral membrane protein 11
  • Synonyms
    C21orf51, FAM165B, SMIM11A, SMIM11B
  • Links
    NCBI Gene ID: 54065
    neXtProt AC: NX_P58511
    UniProt: P58511

  • Chr Location
    21q22.11; chr21:34375480-34416961 (+)  GRCh38
Human Diseases
less
  • References
    4 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    79 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    913
  • Tissues
    161
  • cDNA Data
    6
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000051989 Ensembl Gene Model | MGI Sequence Detail 11756 C57BL/6J ±  kb
transcript ENSMUST00000118064 Ensembl | MGI Sequence Detail 782 Not Applicable  
polypeptide ENSMUSP00000113086 Ensembl | MGI Sequence Detail 55 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 6
    Primer pair 2

    Microarray probesets 3
References
more
  • Summaries
    All 104
    Developmental Gene Expression 4
    Diseases 4
    Gene Ontology 1
    Phenotypes 79
  • Earliest
    J:42265 Huang TT, et al., Superoxide-mediated cytotoxicity in superoxide dismutase-deficient fetal fibroblasts. Arch Biochem Biophys. 1997 Aug 15;344(2):424-32
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory