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1700025G04Rik Gene Detail
Summary
  • Symbol
    1700025G04Rik
  • Name
    RIKEN cDNA 1700025G04 gene
  • Synonyms
    2610510E02Rik, 2900042O04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916649
    NCBI Gene: 69399
  • Alliance
    gene page
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:151760275-151967941 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 64.43 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    5983 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916649
 protein coding gene Chr1:151728154-151967941 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016585
 protein coding gene Chr1:156603274-156855337 (-)
A/J MGP_AJ_G0016567
 protein coding gene Chr1:150282871-150525335 (-)
AKR/J MGP_AKRJ_G0016532
 protein coding gene Chr1:154921748-155172118 (-)
BALB/cJ MGP_BALBcJ_G0016527
 protein coding gene Chr1:150856847-151093789 (-)
C3H/HeJ MGP_C3HHeJ_G0016352
 protein coding gene Chr1:155036282-155280198 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016988
 protein coding gene Chr1:162018792-162277298 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014697
 protein coding gene Chr1:142613092-142847198 (-)
CAST/EiJ MGP_CASTEiJ_G0015931
 protein coding gene Chr1:154489543-154745506 (-)
CBA/J MGP_CBAJ_G0016326
 protein coding gene Chr1:167717625-167981821 (-)
DBA/2J MGP_DBA2J_G0016432
 protein coding gene Chr1:149322373-149552495 (-)
FVB/NJ MGP_FVBNJ_G0016430
 protein coding gene Chr1:147777386-148008090 (-)
LP/J MGP_LPJ_G0016503
 protein coding gene Chr1:157719298-157890979 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016456
 protein coding gene Chr1:175396345-175649462 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017024
 protein coding gene Chr1:154681374-154927507 (-)
PWK/PhJ MGP_PWKPhJ_G0015717
 protein coding gene Chr1:148293145-148534499 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015504
 protein coding gene Chr1:153517990-153762428 (-)
WSB/EiJ MGP_WSBEiJ_G0015994
 protein coding gene Chr1:154770555-155010080 (-)



Homology
more
  • Human Ortholog
    C1orf21, chromosome 1 open reading frame 21
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C1orf21, chromosome 1 open reading frame 21
  • Synonyms
    PIG13
  • Links
    NCBI Gene ID: 81563
    neXtProt AC: NX_Q9H246
    UniProt: Q9H246

  • Chr Location
    1q25.3; chr1:184387029-184629019 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    882
  • Tissues
    24
  • cDNA Data
    17
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 69399 NCBI Gene Model | MGI Sequence Detail 207667 C57BL/6J ±  kb
    transcript NM_197990 RefSeq | MGI Sequence Detail 9789 C57BL/6  
    polypeptide Q8K207 UniProt | EBI | MGI Sequence Detail 121 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 17
      cDNA 17

      Microarray probesets 9
    Other
    Accession IDs
    less
    MGI:1920178, MGI:1923793, MGI:2138524, MGI:3642523
    References
    more
    • Summaries
      All 31
      Developmental Gene Expression 2
      Phenotypes 11
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory