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Ccdc115 Gene Detail
Summary
  • Symbol
    Ccdc115
  • Name
    coiled-coil domain containing 115
  • Synonyms
    2310061I09Rik, Ccp1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916918
    NCBI Gene: 69668
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:34475751-34478753 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 13.22 cM, cytoband B
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    218 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916918
 protein coding gene Chr1:34475751-34478753 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015907
 protein coding gene Chr1:32821394-32824488 (-)
A/J MGP_AJ_G0015891
 protein coding gene Chr1:32039655-32042620 (-)
AKR/J MGP_AKRJ_G0015847
 protein coding gene Chr1:32425675-32428664 (-)
BALB/cJ MGP_BALBcJ_G0015845
 protein coding gene Chr1:31688474-31691413 (-)
C3H/HeJ MGP_C3HHeJ_G0015679
 protein coding gene Chr1:32620191-32628180 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016298
 protein coding gene Chr1:34315343-34318236 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014020
 protein coding gene Chr1:29200058-29203002 (-)
CAST/EiJ MGP_CASTEiJ_G0015259
 protein coding gene Chr1:32479555-32483979 (-)
CBA/J MGP_CBAJ_G0015650
 protein coding gene Chr1:35269222-35275900 (-)
DBA/2J MGP_DBA2J_G0015751
 protein coding gene Chr1:31363351-31366289 (-)
FVB/NJ MGP_FVBNJ_G0015753
 protein coding gene Chr1:30909497-30914047 (-)
LP/J MGP_LPJ_G0015821
 protein coding gene Chr1:33162722-33166283 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015773
 protein coding gene Chr1:37521262-37525642 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016345
 protein coding gene Chr1:32414704-32417891 (-)
PWK/PhJ MGP_PWKPhJ_G0015042
 protein coding gene Chr1:31094106-31096781 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014825
 protein coding gene Chr1:32390658-32393308 (-)
WSB/EiJ MGP_WSBEiJ_G0015321
 protein coding gene Chr1:32396691-32402802 (-)



Homology
more
  • Human Ortholog
    CCDC115, coiled-coil domain containing 115
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC115, coiled-coil domain containing 115
  • Synonyms
    ccp1, CDG2O
  • Links
    NCBI Gene ID: 84317
    neXtProt AC: NX_Q96NT0
    UniProt: Q96NT0

  • Chr Location
    2q21.1; chr2:130337933-130342699 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human CCDC115 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    20
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    740
  • Tissues
    27
  • cDNA Data
    43
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69668 NCBI Gene Model | MGI Sequence Detail 3003 C57BL/6J ±  kb
transcript NM_027159 RefSeq | MGI Sequence Detail 1721 C57BL/6  
polypeptide Q8VE99 UniProt | EBI | MGI Sequence Detail 180 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 44
    cDNA 43
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 31
    Developmental Gene Expression 2
    Gene Ontology 6
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory