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Krtcap3 Gene Detail
Summary
  • Symbol
    Krtcap3
  • Name
    keratinocyte associated protein 3
  • Synonyms
    2010001C09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917065
    NCBI Gene: 69815
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:31409050-31410541 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 17.27 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    85 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917065
 protein coding gene Chr5:31409035-31410546 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029421
 protein coding gene Chr5:29244231-29245742 (+)
A/J MGP_AJ_G0029387
 protein coding gene Chr5:28282720-28284231 (+)
AKR/J MGP_AKRJ_G0029337
 protein coding gene Chr5:29433229-29434742 (+)
BALB/cJ MGP_BALBcJ_G0029398
 protein coding gene Chr5:28797442-28798953 (+)
C3H/HeJ MGP_C3HHeJ_G0029119
 protein coding gene Chr5:29454406-29455917 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029851
 protein coding gene Chr5:31058479-31059990 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027089
 protein coding gene Chr5:25748370-25749884 (+)
CAST/EiJ MGP_CASTEiJ_G0028529
 protein coding gene Chr5:28536667-28538180 (+)
CBA/J MGP_CBAJ_G0029087
 protein coding gene Chr5:31629177-31630688 (+)
DBA/2J MGP_DBA2J_G0029236
 protein coding gene Chr5:28459340-28460851 (+)
FVB/NJ MGP_FVBNJ_G0029194
 protein coding gene Chr5:27878439-27879950 (+)
LP/J MGP_LPJ_G0029321
 protein coding gene Chr5:29697843-29699354 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029223
 protein coding gene Chr5:32493035-32494546 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029885
 protein coding gene Chr5:28948853-28950364 (+)
PWK/PhJ MGP_PWKPhJ_G0028254
 protein coding gene Chr5:27583368-27584879 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028085
 protein coding gene Chr5:28342917-28344428 (+)
WSB/EiJ MGP_WSBEiJ_G0028610
 protein coding gene Chr5:29012770-29014281 (+)



Homology
more
  • Human Ortholog
    KRTCAP3, keratinocyte associated protein 3
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTCAP3, keratinocyte associated protein 3
  • Synonyms
    KCP3
  • Links
    NCBI Gene ID: 200634
    neXtProt AC: NX_Q53RY4
    UniProt: Q53RY4

  • Chr Location
    2p23.3; chr2:27442366-27446481 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    22 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    26
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69815 NCBI Gene Model | MGI Sequence Detail 1492 C57BL/6J ±  kb
transcript NM_027221 RefSeq | MGI Sequence Detail 922 C57BL/6  
polypeptide Q8K177 UniProt | EBI | MGI Sequence Detail 240 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 26
    cDNA 26

    Microarray probesets 4
Other
Accession IDs
less
MGI:2141187
References
more
  • Summaries
    All 42
    Diseases 1
    Gene Ontology 1
    Phenotypes 22
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory