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Slc23a4 Gene Detail
Summary
  • Symbol
    Slc23a4
  • Name
    solute carrier family 23 member 4
  • Synonyms
    2010107G12Rik, LOC243753
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917272
    NCBI Gene: 243753
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:34922213-34965339 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 15.20 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1388 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917272
 protein coding gene Chr6:34922213-34965430 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030567
 protein coding gene Chr6:33065516-33108076 (-)
A/J MGP_AJ_G0030540
 protein coding gene Chr6:31637214-31680130 (-)
AKR/J MGP_AKRJ_G0030467
 protein coding gene Chr6:32714490-32757474 (-)
BALB/cJ MGP_BALBcJ_G0030550
 protein coding gene Chr6:31818300-31862835 (-)
C3H/HeJ MGP_C3HHeJ_G0030263
 protein coding gene Chr6:32664713-32708886 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031004
 protein coding gene Chr6:33894912-33939586 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028216
 protein coding gene Chr6:29728085-29769376 (-)
CAST/EiJ MGP_CASTEiJ_G0029665
 protein coding gene Chr6:32493815-32534556 (-)
CBA/J MGP_CBAJ_G0030241
 protein coding gene Chr6:35194538-35261225 (-)
DBA/2J MGP_DBA2J_G0030385
 protein coding gene Chr6:31517343-31559948 (-)
FVB/NJ MGP_FVBNJ_G0030339
 protein coding gene Chr6:31308624-31351875 (-)
LP/J MGP_LPJ_G0030472
 protein coding gene Chr6:33170242-33215487 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030375
 protein coding gene Chr6:37516408-37560821 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031034
 protein coding gene Chr6:32588457-32631959 (-)
PWK/PhJ MGP_PWKPhJ_G0029379
 protein coding gene Chr6:31139238-31183174 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029215
 protein coding gene Chr6:32271575-32318632 (-)
WSB/EiJ MGP_WSBEiJ_G0029741
 protein coding gene Chr6:32532442-32576773 (-)



Homology
more
  • Human Ortholog
    SLC23A4P, solute carrier family 23 member 4, pseudogene
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLC23A4P, solute carrier family 23 member 4, pseudogene
  • Synonyms
    SLC23A4
  • Links
    NCBI Gene ID: 641842

  • Chr Location
    7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    10
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000029847 Ensembl Gene Model | MGI Sequence Detail 43127 C57BL/6J ±  kb
    transcript ENSMUST00000201355 Ensembl | MGI Sequence Detail 2003 Not Applicable  
    polypeptide ENSMUSP00000144387 Ensembl | MGI Sequence Detail 615 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      5 Sequences
    • InterPro Domains
      IPR006043 Nucleobase cation symporter 2 family
      IPR006042 Xanthine/uracil permease
    Molecular
    Reagents
    less
    • All nucleic 10
      cDNA 10

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:2685314
    References
    more
    • Summaries
      All 22
      Phenotypes 6
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    10/29/2024
    MGI 6.24     		The Jackson Laboratory