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Naif1 Gene Detail
Summary
  • Symbol
    Naif1
  • Name
    nuclear apoptosis inducing factor 1
  • Synonyms
    2310007O20Rik, 4933440H19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918504
    NCBI Gene: 71254
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:32340469-32346965 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 22.09 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    214 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918504
 protein coding gene Chr2:32340469-32346969 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025608
 protein coding gene Chr2:30910151-30916647 (+)
A/J MGP_AJ_G0025585
 protein coding gene Chr2:29597229-29603725 (+)
AKR/J MGP_AKRJ_G0025555
 protein coding gene Chr2:30657406-30663906 (+)
BALB/cJ MGP_BALBcJ_G0025582
 protein coding gene Chr2:29725040-29731536 (+)
C3H/HeJ MGP_C3HHeJ_G0025342
 protein coding gene Chr2:30547394-30553890 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026026
 protein coding gene Chr2:31861855-31868351 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023435
 protein coding gene Chr2:28320906-28327435 (+)
CAST/EiJ MGP_CASTEiJ_G0024804
 protein coding gene Chr2:30485503-30491999 (+)
CBA/J MGP_CBAJ_G0025320
 protein coding gene Chr2:33052254-33058750 (+)
DBA/2J MGP_DBA2J_G0025453
 protein coding gene Chr2:29365633-29372129 (+)
FVB/NJ MGP_FVBNJ_G0025415
 protein coding gene Chr2:29241639-29248135 (+)
LP/J MGP_LPJ_G0025539
 protein coding gene Chr2:30786532-30793028 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025446
 protein coding gene Chr2:32705543-32712039 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026084
 protein coding gene Chr2:30538611-30545101 (+)
PWK/PhJ MGP_PWKPhJ_G0024552
 protein coding gene Chr2:29269793-29276292 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024352
 protein coding gene Chr2:30695115-30701606 (+)
WSB/EiJ MGP_WSBEiJ_G0024873
 protein coding gene Chr2:30708578-30715074 (+)



Homology
more
  • Human Ortholog
    NAIF1, nuclear apoptosis inducing factor 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    NAIF1, nuclear apoptosis inducing factor 1
  • Synonyms
    bA379C10.2, C9orf90
  • Links
    NCBI Gene ID: 203245
    neXtProt AC: NX_Q69YI7
    UniProt: Q69YI7

  • Chr Location
    9q34.11; chr9:128061233-128068206 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    14
  • GO References
    5
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039164 Ensembl Gene Model | MGI Sequence Detail 6497 C57BL/6J ±  kb
transcript ENSMUST00000048431 Ensembl | MGI Sequence Detail 4650 Not Applicable  
polypeptide ENSMUSP00000048764 Ensembl | MGI Sequence Detail 327 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
Other
Accession IDs
less
MGI:1919130
References
more
  • Summaries
    All 27
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory