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5430402E10Rik Gene Detail
Summary
  • Symbol
    5430402E10Rik
  • Name
    RIKEN cDNA 5430402E10 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918601
    NCBI Gene: 71351
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:76963392-76968668 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 38.32 cM, cytoband A7.1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    46 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918601
 protein coding gene ChrX:76963392-76968668 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035873
 protein coding gene ChrX:73695969-73701283 (+)
A/J MGP_AJ_G0035860
 protein coding gene ChrX:74040710-74048045 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0035840
 protein coding gene ChrX:73046252-73052649 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0036371
 protein coding gene ChrX:76105370-76114902 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033206
 protein coding gene ChrX:73261988-73267273 (+)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0035623
 protein coding gene ChrX:72669860-72674522 (+)
LP/J MGP_LPJ_G0035768
 protein coding gene ChrX:74585335-74590599 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035658
 protein coding gene ChrX:80815421-80953422 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036397
 protein coding gene ChrX:73554100-73684132 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0034976
 protein coding gene ChrX:72740995-72748407 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71351 NCBI Gene Model | MGI Sequence Detail 5277 C57BL/6J ±  kb
transcript NM_027768 RefSeq | MGI Sequence Detail 798 C57BL/6  
polypeptide NP_082044 RefSeq | MGI Sequence Detail 173 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 16
    Gene Ontology 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory