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Cyb561d1 Gene Detail
Summary
  • Symbol
    Cyb561d1
  • Name
    cytochrome b-561 domain containing 1
  • Synonyms
    1600010M23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919273
    NCBI Gene: 72023
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:108103003-108108528 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 46.86 cM, cytoband F3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    161 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919273
 protein coding gene Chr3:108103003-108109542 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027769
 protein coding gene Chr3:109734811-109740336 (-)
A/J MGP_AJ_G0027729
 protein coding gene Chr3:106256126-106261651 (-)
AKR/J MGP_AKRJ_G0027694
 protein coding gene Chr3:108842587-108848112 (-)
BALB/cJ MGP_BALBcJ_G0027741
 protein coding gene Chr3:105957298-105962823 (-)
C3H/HeJ MGP_C3HHeJ_G0027471
 protein coding gene Chr3:109185982-109191507 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028185
 protein coding gene Chr3:113839563-113845088 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025523
 protein coding gene Chr3:102407520-102413043 (-)
CAST/EiJ MGP_CASTEiJ_G0026927
 protein coding gene Chr3:108571341-108576883 (-)
CBA/J MGP_CBAJ_G0027446
 protein coding gene Chr3:117702957-117708482 (-)
DBA/2J MGP_DBA2J_G0027588
 protein coding gene Chr3:105438173-105443698 (-)
FVB/NJ MGP_FVBNJ_G0027556
 protein coding gene Chr3:103325620-103331145 (-)
LP/J MGP_LPJ_G0027695
 protein coding gene Chr3:111152728-111158253 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027586
 protein coding gene Chr3:123769726-123775251 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028240
 protein coding gene Chr3:108441279-108446833 (-)
PWK/PhJ MGP_PWKPhJ_G0026653
 protein coding gene Chr3:105187930-105193472 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026473
 protein coding gene Chr3:106577255-106582756 (-)
WSB/EiJ MGP_WSBEiJ_G0027007
 protein coding gene Chr3:108970622-108976147 (-)



Homology
more
  • Human Ortholog
    CYB561D1, cytochrome b561 family member D1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CYB561D1, cytochrome b561 family member D1
  • Links
    NCBI Gene ID: 284613
    neXtProt AC: NX_Q8N8Q1
    UniProt: Q8N8Q1

  • Chr Location
    1p13.3; chr1:109494052-109502932 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    33
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048796 Ensembl Gene Model | MGI Sequence Detail 5526 C57BL/6J ±  kb
transcript ENSMUST00000106655 Ensembl | MGI Sequence Detail 4275 Not Applicable  
polypeptide ENSMUSP00000102266 Ensembl | MGI Sequence Detail 229 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 33
    cDNA 33

    Microarray probesets 5
Other
Accession IDs
less
MGI:2139766, MGI:2139984
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:347599 Raja R, et al., Insertion of a neomycin selection cassette in the Amigo1 locus alters gene expression in the olfactory epithelium leading to region-specific defects in olfactory receptor neuron development. Genesis. 2024 Apr;62(2):e23594
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory