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Pak5 Gene Detail
Summary
  • Symbol
    Pak5
  • Name
    p21 (RAC1) activated kinase 5
  • Synonyms
    2900083L08Rik, Pak5, Pak7
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920334
    NCBI Gene: 241656
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:135923024-136229887 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 67.32 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    8756 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920334
 protein coding gene Chr2:135923008-136229899 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026557
 protein coding gene Chr2:139843771-140178994 (-)
A/J MGP_AJ_G0026521
 protein coding gene Chr2:134157835-134475047 (-)
AKR/J MGP_AKRJ_G0026495
 protein coding gene Chr2:138013047-138338156 (-)
BALB/cJ MGP_BALBcJ_G0026533
 protein coding gene Chr2:134547521-134857983 (-)
C3H/HeJ MGP_C3HHeJ_G0026276
 protein coding gene Chr2:138467929-138791550 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026978
 protein coding gene Chr2:144050184-144381826 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024355
 protein coding gene Chr2:128721522-129025132 (-)
CAST/EiJ MGP_CASTEiJ_G0025737
 protein coding gene Chr2:138813916-139136385 (-)
CBA/J MGP_CBAJ_G0026256
 protein coding gene Chr2:149418509-149755060 (-)
DBA/2J MGP_DBA2J_G0026390
 protein coding gene Chr2:133537257-133841939 (-)
FVB/NJ MGP_FVBNJ_G0026354
 protein coding gene Chr2:132126507-132434010 (-)
LP/J MGP_LPJ_G0026494
 protein coding gene Chr2:140013902-140333586 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026374
 protein coding gene Chr2:153223856-153581335 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027033
 protein coding gene Chr2:138025965-138345793 (-)
PWK/PhJ MGP_PWKPhJ_G0025473
 protein coding gene Chr2:133136689-133444922 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025275
 protein coding gene Chr2:137127939-137435860 (-)
WSB/EiJ MGP_WSBEiJ_G0025811
 protein coding gene Chr2:138947265-139266500 (-)



Homology
more
  • Human Ortholog
    PAK5, p21 (RAC1) activated kinase 5
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PAK5, p21 (RAC1) activated kinase 5
  • Synonyms
    PAK7
  • Links
    NCBI Gene ID: 57144
    neXtProt AC: NX_Q9P286
    UniProt: Q9P286

  • Chr Location
    20p12.2; chr20:9537370-9839076 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotypes from 2 alleles in 3 genetic backgrounds
    11 phenotypes from multigenic genotypes
    35 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygous null mice exhibit impaired active avoidance learning but are otherwise normal.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    45
  • GO References
    13
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    737
  • Tissues
    18
  • cDNA Data
    29
  • Literature Summary
    5
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000039913 Ensembl Gene Model | MGI Sequence Detail 306864 C57BL/6J ±  kb
    transcript ENSMUST00000035264 Ensembl | MGI Sequence Detail 4848 Not Applicable  
    polypeptide ENSMUSP00000047285 Ensembl | MGI Sequence Detail 719 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 30
      cDNA 29
      Primer pair 1

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:6436713
    References
    more
    • Summaries
      All 70
      Developmental Gene Expression 5
      Diseases 1
      Gene Ontology 13
      Phenotypes 35
    • Earliest
      J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
    • Latest
      J:357470 Hu B, et al., PAK2 is necessary for myelination in the peripheral nervous system. Brain. 2024 May 3;147(5):1809-1821
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory